Published June 8, 2022
| Version v5
Dataset
Open
Datasets used for the performance evaluation of kataegis detection tools
Description
These two datasets (.csv files) were used for the performance evaluation of katdetectr and other publicly available kataegis detection tools (link to paper, not yet published).
The synthetic data was generated using the generateSyntheticData function from the katdetectr package (https://github.com/ErasmusMC-CCBC/katdetectr).
Additionally we provide all files and RData objects needed for running the scripts for the performance evaluation which can be found on GitHub at: https://github.com/ErasmusMC-CCBC/evaluation_katdetectr.
We present this dataset under the Public Domain Dedication (CC0) waiver.
Files
sampleSummary.txt
Files
(684.7 MB)
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md5:b90572760be95fb598109eea525f93bd
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76.3 MB | Download |
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md5:aee7a34dae7d0e457cbf7588bf140d49
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308.7 MB | Download |
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md5:64019b3035801b0f7feba8c019d41e44
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3.6 kB | Download |
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md5:69bd52b9f217bc041ea2b1f16474e938
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118.7 kB | Download |
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md5:7545689de2090e811e59f7578f81d87f
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20.0 kB | Download |
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md5:841f10b5faeceed4976be0fa296357c6
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23.9 MB | Download |
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md5:89d0b011b54c9dea04174ce1da19c0f3
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9.8 kB | Download |
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md5:c9f6d286dc4cb351cc3c74e150884a5d
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10.2 kB | Download |
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md5:9dd94aeb0c880d9dfc3a8d9fdc85a1fd
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15.3 kB | Download |
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md5:bd366f481cea08d9ee6f2c376cbfa8b6
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31.2 kB | Download |
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md5:168cdc28a96cbb5f795eddeb0d283bfa
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418.4 kB | Preview Download |
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md5:e115623c73e24610153992ce4af9dcb7
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275.2 MB | Download |
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md5:dd0d921e702de64833235557eb29a977
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846 Bytes | Preview Download |
Additional details
References
- Alexandrov LB, Nik-Zainal S, Wedge DC, Aparicio SA, Behjati S, Biankin AV, Bignell GR, Bolli N, Borg A, Børresen-Dale AL, Boyault S. Signatures of mutational processes in human cancer. Nature. 2013 Aug;500(7463):415-21.