Published June 14, 2023
| Version v2
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Dual spatially resolved transcriptomics for human host-pathogen colocalization studies in FFPE tissue sections
Creators
- 1. Department of Gene Technology, KTH Royal Institute of Technology, SciLifeLab, Stockholm, Sweden
- 2. Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden
- 3. 2nd Department of Pathology, Semmelweis University, Budapest, Hungary
- 4. 10X Genomics, Pleasanton, California, USA
- 5. Department of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden
- 6. Department of Oncology-Pathology, Karolinska Institutet, 17177 Stockholm, Sweden
Contributors
Contact person:
- 1. Department of Gene Technology, KTH Royal Institute of Technology, SciLifeLab, Stockholm, Sweden
Description
Code for reproducing the analysis done in the study Dual spatially resolved transcriptomics for human host-pathogen colocalization studies in FFPE tissue sections. More details of the same in the 'Availability of data and materials' section.
Files
DualST_Study.zip
Files
(71.2 MB)
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md5:ae8408e22cc09a52e5d739c6cb594bd7
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Additional details
Related works
- Is cited by
- Preprint: 10.1101/2022.03.14.484288 (DOI)