Published June 7, 2023
| Version v1
Dataset
Open
PubChem lists to Study the Exposome of Mild Cognitive Impairment and Alzheimer's Disease on Cerebrospinal Fluid
Description
Collection of 4 lists of chemicals associated to Alzheimer's disease (AD) and related disorders.
The following table describes the mentioned lists.
| Name | Description |
| AD-database | Database of 41,917 chemicals related to AD and other neurodegenerative disorders. CIDs co-ocurring with the 27 selected MeSH terms (*see below) were merged and mapped to the parent CIDS. |
| TOP1 | List of 1,268 chemicals having D000544 (AD MeSH code) as the first neighbor . |
| SC20 | List of 247 chemicals created after truncating by 1/20 of the maximum co-ocurrence score of the chemical neighbors for D000544. |
| AD-CTD | List of 86 chemicals specifically related to AD in the Comparative Toxicogenomic Database (CTD) |
*Selected MeSH terms for the AD-database: D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647,D000647 and D000647.
HMDB-CSF can be downloaded here.
PubChemLite for Exposomics (version 1.12.0) can be found here.
Files
AD-CTD.csv
Additional details
Related works
- Cites
- https://github.com/rickhelmus/patRoon (URL)
- Is identical to
- Presentation: 10.5281/zenodo.8012871 (DOI)
- Is referenced by
- Presentation: 10.5281/zenodo.8014269 (DOI)