Published June 1, 2023
| Version v0.5.9
Software
Open
INCATools/ontology-access-kit: v0.5.9
Authors/Creators
- 1. Lawrence Berkeley National Laboratory
- 2. Harvard Medical School
- 3. @jhu-bids
- 4. Leibniz-Institut für Katalyse e.V. (LIKAT)
- 5. LBNL
- 6. Lawrence Berkeley National Lab
- 7. Uni of Cambridge / @PomBase
- 8. semanticly Ltd
- 9. SIB Swiss Institute of Bioinformatics
- 10. @det-lab @tis-lab @monarch-initiative
- 11. Queen Mary University of London
Description
What's Changed
- SqlImplemplementation: rebuild the relationship index after a KGCL edge change is applied by @cmungall in https://github.com/INCATools/ontology-access-kit/pull/576
- Update to use semsimian 0.1.14 with better optimized semsi by @justaddcoffee in https://github.com/INCATools/ontology-access-kit/pull/575
- Fix slug in benchmark target in Makefile (rustsim: -> semsimian) by @justaddcoffee in https://github.com/INCATools/ontology-access-kit/pull/577
- graph-traversal improvements. by @cmungall in https://github.com/INCATools/ontology-access-kit/pull/583
- Ensure kgx adapter works with sqlalchemy2 fixes #580 by @cmungall in https://github.com/INCATools/ontology-access-kit/pull/581
- modify lexmatch to utilize xrefs in both directions #585 by @cmungall in https://github.com/INCATools/ontology-access-kit/pull/586
Full Changelog: https://github.com/INCATools/ontology-access-kit/compare/v0.5.8...v0.5.9
Files
INCATools/ontology-access-kit-v0.5.9.zip
Files
(14.4 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/INCATools/ontology-access-kit/tree/v0.5.9 (URL)