Published May 30, 2023 | Version 2

Marine Image Analysis Handbook for RootPainter

  • 1. University of Aberdeen
  • 2. University of Copenhagen
  • 3. University of Edinburgh

Description

This handbook details use of the open-source and user friendly machine learning tool, RootPainter, for analysis of marine image data. This tool can be used to extract area measurements for a given species without requiring pre-processing of images.

Originally compiled for use in an interactive workshop, the handbook takes you through installation of the tool and the training process on a practise dataset identifying Primnoa resedaeformis. It also contains advice for using the tool on your own data.

Files

Marine Image Analysis Workshop.pdf

Files (3.7 MB)

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Additional details

Related works

Is supplement to
10.1101/2023.10.12.562046 (DOI)

Dates

Updated
2023-10-17