Planned intervention: On Thursday 19/09 between 05:30-06:30 (UTC), Zenodo will be unavailable because of a scheduled upgrade in our storage cluster.
Published May 24, 2023 | Version v1
Dataset Open

TMI cheese metagenomics sourmash output files

Description

Sourmash output files from signature sketches, compare, gather, and taxonomy of time-series cheese metagenomes generated using both short- and long-read sequencing technologies. Originally generated as part of the pub "Paired long- and short-read metagenomics of cheese rind microbial communities at multiple time points". Analysis code of this data provided on Github at https://github.com/Arcadia-Science/metagenomics-of-cheese-rind-microbiomes

To directly analyze this data, download and unzip the tarball. Clone the Github repository and point to the 2023-05-23-TMI-processed-data directory within a project using the `scripts/TMI-sourmash-explore.R` script. Install the packages used in the script if necessary. 

Files

Files (505.5 MB)

Name Size Download all
md5:5eaaf75d97c266153673c410666f5656
505.5 MB Download