Transcription factor dataset in the pea genome

Figure 1: A. Comparison between genome-wide TF datasets of P. sativum (1807 TFs), M. truncatula (2140 TFs) and A. thaliana (1709 TFs). B. Top 10 TF families identified in the pea genome (percentage proportion is given in brackets). C. Proportion of TFs reported to the total number of genes in respective plant genomes (P. sativum genomes v1a: 44,756 genes, M. truncatula v4.0: 50,894 genes, A. thaliana TAIR10: 27,382 genes).

Figure 2: Comparison of the TF family distribution between TF datasets of P. sativum, M. truncatula and A. thaliana.

Table 1: TF dataset identified in the pea genome. The 1807 TF dataset is shown with TF family prediction (from PlantTFDB) and the gene description available from the Pisum sativum genome (v1a). The best BlastP hit against M. truncatula (v4) and A. thaliana (TAIR10) proteomes is presented with both coverage (%) and e-value.

Table 2: Pea, Medicago and Arabidopsis TF datasets  with unique gene identifier, predicted TF family (from PlantTFDB) and gene description (retrieved from respective genome annotation) is displayed on a second sheet.