microbiome/miaSim: v3.15-alpha

• simulateGLV by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/1
• Vignettes by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/2
• SOI simulation files by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/6
• HubbellSE is ready to be merged by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/7
• tests by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/14
• Authors by @antagomir in https://github.com/microbiome/miaSim/pull/19
• Updates with BiocCheck::BiocCheckGitClone() fail by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/20
• Basic changes by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/22
• Stochastic logistic simulation function by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/23
• Utils by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/26
• Devel by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/27
• matrix to assay by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/32
• vignette update by @antagomir in https://github.com/microbiome/miaSim/pull/31
• Switch to TreeSE support by @antagomir in https://github.com/microbiome/miaSim/pull/35
• fixed README by @antagomir in https://github.com/microbiome/miaSim/pull/37
• Maintainer should be listed first by @antagomir in https://github.com/microbiome/miaSim/pull/38
• ok by @antagomir in https://github.com/microbiome/miaSim/pull/39
• website fix by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/42
• test automated builds by @antagomir in https://github.com/microbiome/miaSim/pull/43
• build actions by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/44
• Update functions docs and tests by @gaoyu19920914 in https://github.com/microbiome/miaSim/pull/34
• testing website by @antagomir in https://github.com/microbiome/miaSim/pull/47
• Test by @antagomir in https://github.com/microbiome/miaSim/pull/48
• fix GHA by @antagomir in https://github.com/microbiome/miaSim/pull/49
• Test by @antagomir in https://github.com/microbiome/miaSim/pull/50
• Test by @antagomir in https://github.com/microbiome/miaSim/pull/51
• maintainer email changed by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/53
• Output by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/59
• add logo by @TuomasBorman in https://github.com/microbiome/miaSim/pull/55
• miaSimShiny link added by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/57
• Added back estimateAFromSimulations and generateSimulations by @antagomir in https://github.com/microbiome/miaSim/pull/63
• Vignette & tests by @antagomir in https://github.com/microbiome/miaSim/pull/65
• Vignette fix by @antagomir in https://github.com/microbiome/miaSim/pull/68
• Assay name by @antagomir in https://github.com/microbiome/miaSim/pull/69
• examples moved to vignette by @YagmurSimsekk in https://github.com/microbiome/miaSim/pull/66
• Fix typos in method functions and packages vignette by @Daenarys8 in https://github.com/microbiome/miaSim/pull/70
• parallel computation in caseStudy2 by @gaoyu19920914 in https://github.com/microbiome/miaSim/pull/71
• Case2 by @antagomir in https://github.com/microbiome/miaSim/pull/72

• @YagmurSimsekk made their first contribution in https://github.com/microbiome/miaSim/pull/1
• @antagomir made their first contribution in https://github.com/microbiome/miaSim/pull/19
• @gaoyu19920914 made their first contribution in https://github.com/microbiome/miaSim/pull/34
• @TuomasBorman made their first contribution in https://github.com/microbiome/miaSim/pull/55
• @Daenarys8 made their first contribution in https://github.com/microbiome/miaSim/pull/70

Full Changelog: https://github.com/microbiome/miaSim/commits/MEE_manuscript