Published April 10, 2023 | Version v2
Journal article Open

Modeling Pathogen Transmission in Heterogeneous Networks: Spectral Characterization and Applications

  • 1. College of Computing, Georgia Institute of Technology
  • 2. Biocomplexity Institute, University of Virginia
  • 3. Department of Computer Science, University of Virginia

Description

Healthcare-associated infections (HAIs) are a major problem in hospital infection control. Although HAIs can be suppressed using contact precautions, such precautions are expensive, and we can only apply them to a small fraction of patients (i.e., a limited budget). In this work, we focus on two clinical problems arising from the limited budget: (a) choosing the best patients to be placed under precaution given a limited budget to minimize the spread (the Isolation Problem), and (b) choosing the best patients to release when limited budget requires some of the patients be cleared from precaution (the Clearance Problem). A critical challenge in addressing them is that HAIs have multiple transmission pathways such that locations can also accumulate 'load' and spread the disease. One of the most common practices when placing patients under contact precautions is the regular clearance of pathogen loads. However, standard propagation models like Independent Cascade (IC)/Susceptible-Infected-Susceptible (SIS) cannot capture such mechanisms directly. Hence to account for this challenge, using non-linear system theory, we develop a novel spectral characterization of a recently proposed pathogen load based model, 2-Mode-SIS model, on people/location networks to capture spread dynamics of HAIs. We formulate the two clinical problems using this spectral characterization and develop effective and efficient algorithms to address the formulated problems. Our experiments show that our methods outperform several natural structural and clinical approaches on real-world hospital testbeds and pick meaningful solutions.

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