Published March 31, 2023 | Version v1
Preprint Open

Building a FAIR image data ecosystem for microscopy communities

Description

Bioimaging has now entered the era of big data with faster than ever development of complex microscopy technologies leading to increasingly complex datasets. This enormous increase in data size and informational complexity within those datasets has brought with it several difficulties in terms of common and harmonized data handling, analysis and management practices, which are currently hampering the full potential of image data being realized. Here we outline a wide range of efforts and solutions currently being developed by the microscopy community to address these challenges on the path towards FAIR bioimage data. We also highlight how different actors in the microscopy ecosystem are working together, creating synergies that develop new approaches, and how research infrastructures, such as Euro-BioImaging, are fostering these interactions to shape the field. 

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Additional details

Funding

EOSC-Life – Providing an open collaborative space for digital biology in Europe 824087
European Commission
EOSC Future – EOSC Future 101017536
European Commission
BY-COVID – Beyond COVID 101046203
European Commission
AI4LIFE – Artificial Intelligence for Image Data Analysis in the Life Sciences 101057970
European Commission
ISIDORe – Integrated Services for Infectious Disease Outbreak Research 101046133
European Commission