Published June 3, 2023 | Version v1
Dataset Open

Ringer analysis of mAMCase structures

  • 1. University of California, San Francisco

Description

This directory contains all files required to analyze the mouse AMCase structures using Ringer as presented in Supplemental Figure 7 in the manuscript Díaz et al. (2023).

 

Structures were analyzed using Ringer. Ringer data was analyzed using Python. Figures were compiled using Adobe Illustrator.

 

Files included in this directory:

8fXX

- Ringer output files for each mAMCase structure reported.

 

Figures
- contains .PNG files of Ringer plots for Asp136, Asp138, and Glu140 of each chain of each structure reported.

 

Contact:
Roberto Efraín Díaz, robertoefrain.diaz@ucsf.edu

James Fraser, jfraser@fraserlab.com

Files

Ringer.zip

Files (154.3 MB)

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md5:21b9ea49b8ef5e4bf920b701482d7d82
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Additional details

Funding

Targeting chitin in fibrotic lung disease 5R01HL148033-03
National Institutes of Health

References

  • Díaz, Roberto Efraín et al. (2023). Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.