Published December 15, 2022
| Version v3
Software
Open
Profiling the Heterogeneity of Colorectal Cancer Consensus Molecular Subtypes using Spatial Transcriptomics: detailed results and notebooks
Creators
- 1. Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland
Description
The content of this repository is linked to the following publication:
Valdeolivas, A., Amberg, B., Giroud, N. et al. Profiling the heterogeneity of colorectal cancer consensus molecular subtypes using spatial transcriptomics. npj Precis. Onc. 8, 10 (2024). https://doi.org/10.1038/s41698-023-00488-4
In particular, it contains the notebooks associated with the scripts deposited in our github repository. In addition, detailed deconvolution results on our set of ST CRC samples using the annotations from the SMC cohort can also be found.
Files
ResultsExploration_Count_SN048_A121573_Rep1.ipynb
Files
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