Published March 16, 2023 | Version v1

Data and code for: Failure to purge: Population and individual inbreeding effects on fitness across generations of wild Impatiens capensis

  • 1. University of Wisconsin-Madison

Description

Inbreeding exposes deleterious recessive alleles in homozygotes, lowering fitness and generating inbreeding depression (ID). Both purging (via selection) and fixation (via drift) should reduce segregating deleterious mutations and ID in more inbred populations. These theoretical predictions are not well-tested in wild populations, which is concerning given purging/fixation have opposite fitness outcomes. We examined how individual- and population-level inbreeding and genomic heterozygosity affected maternal and progeny fitness within and among 12 wild populations of Impatiens capensis. We quantified maternal fitness in home sites, maternal multilocus heterozygosity (using 12,560 SNPs), and lifetime fitness of selfed and predominantly outcrossed progeny in a common garden. These populations spanned a broad range of individual- (fi = -0.17–0.98) and population-level inbreeding (FIS = 0.25–0.87). More inbred populations contained fewer polymorphic loci, less fecund mothers, and smaller progeny, suggesting higher fixed loads. However, despite appreciable ID (mean: 8.8 lethal equivalents per gamete), ID did not systematically decline in more inbred population. More heterozygous mothers were more fecund and produced fitter progeny in outcrossed populations, but this pattern unexpectedly reversed in highly inbred populations. These observations suggest that persistent overdominance or some other force acts to forestall purging and fixation in these populations.

Notes

This data package includes the files needed to reproduce the analyses for the paper: Toczydlowski, R. H., and Waller, D. M. 2023. Failure to purge: Population and individual inbreeding effects on fitness across generations of wild Impatiens capensis. Evolution, under review.

More detailed methods are available in the README for this data package and in the associated scientific paper.

A dynamic version of this data package is also housed in a git repository on BitBucket at:
https://bitbucket.org/toczydlowski/inbreeding_effects_in_impatiens

Funding provided by: National Science Foundation
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100000001
Award Number: DGE-1256259

Funding provided by: University of Wisconsin-Madison
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100007015
Award Number: Internal awards

Funding provided by: Wisconsin Alumni Research Foundation
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100001395
Award Number:

Funding provided by: University of Wisconsin-Madison
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100007015
Award Number:

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