Published February 23, 2023
| Version v0.2.16
Software
Open
pyPESTO - Parameter EStimation TOolbox for python
Description
- Optimize:
- sacess optimizer (#988, #997)
- Warn only once if using ineffiecient objective settings (#996)
- Hierarchical Optimization (#1006)
- Fix cma documentation (#987)
- Petab
- Improvement to create_startpoint_method() (#1018)
- Sampling:
- Dynesty sampler (#1002)
- Fix test/sample/test_sample.py::test_samples_cis failures (#1004)
- Visualization:
- Fix misuse of start indices in waterfall plot (#1000)
- Fix large function values in clustering for visualizations (#999)
- parameter correlation diverging color scheme (#1009)
- Optimization Parameter scatter plot (#1015)
- Profiling:
- added option to profile the whole parameter bounds. (#1014)
- General
- Add CODEOWNERS (#1001)
- Add list of publications using pypesto (#1008)
- allow passing results to init of pypesto.Result (#998)
- Updated flake8 to ignore Error B028 from bugbear until support for python 3.8 runs out. (#1005)
- black update (#1010)
- Doc typo fixes (#995)
- Doc: Install amici on RTD (#1016)
- Add getting_started notebook (#1023)
- remove alernative formats build (#1022)
Notes
If you use this software, please cite it using these metadata.
Files
ICB-DCM/pyPESTO-v0.2.16.zip
Files
(5.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:7be6293bebb5cdc56efa708fde87bef0
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5.6 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/ICB-DCM/pyPESTO/tree/v0.2.16 (URL)