Published January 30, 2023
| Version 1.2
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.2.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
- genomad_hmm_v1.2.tar.gz: HMMER HMM models.
- genomad_metadata_v1.2.tsv.gz: Metadata for all the 227,897 markers.
- genomad_msa_v1.2.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(5.1 GB)
| Name | Size | Download all |
|---|---|---|
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md5:6db43d74185070dcadfdd5eaf1e555a1
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849.0 MB | Download |
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md5:e37283e0e8b024eef907cc32c705590e
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3.5 GB | Download |
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md5:012c4ff71eae88a1de054e4af8f76cd3
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6.3 MB | Download |
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md5:643c1bfc02262ebe0f2e7ce4c5c8a8ec
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696.5 MB | Download |