acornamr/acorn-dashboard: v2.5.8

There are two key updates in this version:

• Hopefully a "final" fix to the issue of missing specimen numbers in the lab data file – if these are encountered, the app should now correctly define an arbitrary specimen number to each row of data where there is a missing value and then proceed with matching to clinical data. This will remove the situation where, if there were many missing specimen numbers, all of the rows would be assigned the same specimen number value (so it would like you had a single specimen in the lab file with potentially hundreds of isolates attached to it). This was only noticed in two locations, should be a silent update for most sites.
• An improvement to the AMR plots which show co-resistance. These plots are useful but they can only display isolate data where all antibiotics were tested. This is obviously not always the case, such as when second line tests are done only on isolates resistance to key first line drugs. We have added now an option to remove antibiotics from this plot so you can see what you would like in this plot (see the bottom image) – you can select multiple antibiotics to remove if needed / helpful.