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Published October 6, 2021 | Version v5
Dataset Open

Body site-typical microbiome signatures

Authors/Creators

  • 1. Department of Epidemiology and Biostatistics, School of Puublic Health, City University of New York

Contributors

Data curator:

Description

DEPRECATED - this record is no longer being updated. Please see https://doi.org/10.5281/zenodo.7544549 for all future versions. 

Using the curatedMetagenomicData Bioconductor package (3.2.1) we calculated taxa prevalence of healthy control samples for each body site, at species and genus taxonomic levels, stratified by adult and child.

Notes

https://doi.org/10.5281/zenodo.7544549

Files

unhealthystool_genus.csv

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Additional details

Related works

Is obsoleted by
Dataset: 10.5281/zenodo.7544549 (DOI)

Funding

National Institutes of Health
Exploiting public metagenomic data to uncover cancer-microbiome relationships 5R01CA230551-04