Published January 4, 2023 | Version v1
Journal article Restricted

Morphological and molecular characterization of Udotea species (Bryopsidales, Chlorophyta) from northeastern Brazil with a new record of U. dotyi from the western south Atlantic

  • 1. Post-graduate Programme "Biodiversidade Vegetal e Meio Ambiente", Instituto de Pesquisas Ambientais, Av. Miguel Estefno, 3687, Água Funda, 04301-012 - São Paulo, SP - Brazil & Núcleo de Conservação da Biodiversidade, Instituto de Pesquisas Ambientais, Av. Miguel Estefno, 3687, Água Funda, 04301-012 - São Paulo, SP - Brazil & mayara.caroline2@hotmail.com; https://orcid.org/0000-0002-5791-6664
  • 2. Departamento de Biologia, Universidade Federal Rural de Pernambuco, 52171-900, Recife, Pernambuco - Brazil & soniabp@terra.com.br; https://orcid.org/0000-0001-9166-183X
  • 3. Departamento de Biologia, Universidade Federal Rural de Pernambuco, 52171-900, Recife, Pernambuco - Brazil & mfocarvalho@yahoo.com.br; https://orcid.org/0000-0002-4468-0795
  • 4. Departamento de Genética, Universidade Federal de Pernambuco, 1235, 50670-901, Recife, Pernambuco - Brazil & ana.iseppon@ufpe.br; https://orcid.org/0000-0002-0575-3197
  • 5. Departamento de Biologia, Universidade Federal Rural de Pernambuco, 52171-900, Recife, Pernambuco - Brazil & carolnany@gmail.com; https://orcid.org/0000-0002-8091-3779
  • 6. Post-graduate Programme "Biodiversidade Vegetal e Meio Ambiente", Instituto de Pesquisas Ambientais, Av. Miguel Estefno, 3687, Água Funda, 04301-012 - São Paulo, SP - Brazil & mtfujii@sp.gov.br; https://orcid.org/0000-0001-6752-1570
  • 7. Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, 05508-090, São Paulo, SP - Brazil & vcassano@usp.br; https://orcid.org/0000-0002-4461-4405

Description

Rocha, Mayara C. B. S., Pereira, Sonia M. B., Oliveira-Carvalho, Maria F., Benko- Iseppon, Ana M., Ximenes, Caroline F., Fujii, Mutue T., Cassano, Valéria (2023): Morphological and molecular characterization of Udotea species (Bryopsidales, Chlorophyta) from northeastern Brazil with a new record of U. dotyi from the western south Atlantic. Phytotaxa 578 (1): 57-74, DOI: 10.11646/phytotaxa.578.1.3, URL: http://dx.doi.org/10.11646/phytotaxa.578.1.3

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

References

  • Acosta-Calderon, J.A., Hernandez-Rodriguez, C., Mendoza-Gonzalez, A.C. & Mateo-Cid, L.E. (2018) Diversity and distribution of Udotea genus J.V. Lamouroux (Chlorophyta, Udoteaceae) in the Yucatan peninsula littoral, Mexico. Phytotaxa 345: 179-218. https://doi.org/10.11646/phytotaxa.345.3.1
  • Barata, D. (2004) Cloroficeas Marinhas Bentonicas do Estado do Espirito Santo. Instituto de Botanica da Secretaria de Estado do Meio Ambiente, S"o Paulo. 210 pp.
  • Bouckaert, R., Vaughan, T.G., Barido-Sottani, J., Duchene, S., Fourment, M., Gavryushkina, A., Heled, J., Jones, G., K¸hnert, D., DeMaio, N., Matschiner, M., Mendes, F.K., M¸ller, N.F., Ogilvie, H.A., du Plessis, L., Popinga, A., Rambaut, A., Rasmussen, D., Siveroni, I., Suchard, M.A., Wu, C.-H., Xie, D., Zhang, C., Stadler, T. & Drummond, A.J. (2019) BEAST 2.5: an advanced software platform for Bayesian evolutionary analysis. PLoS Computational Biology 15, e1006650. https://doi.org/10.1371/journal.pcbi.1006650
  • Clifton, K.E. & Clifton, L.M. (1999) The Phenology Of Sexual Reproduction By Green Algae (Bryopsidales) On Caribbean Coral Reefs. Journal of Phycology 35: 24-34. https://doi.org/10.1046/j.1529-8817.1999.3510024.x
  • Collado-Vides, L., Suarez, M.A., Cabrera, R. (2009) Una Revision Taxonomica Del Genero Udotea em el Caribe Mexicano y Cubano. Revista Investigaciones Marinas 30: 145-61.
  • Coppejans, E., Leliaert, F., Verbruggen, H., Prathep, A. & De Clerck, O. (2011) Rhipidosiphon lewmanomontiae sp. nov. (Bryopsidales, Chlorophyta), a calcified udoteacean alga from the central Indo-Pacific based on morphological and molecular investigations. Phycologia 50: 403-412. https://doi.org/10.2216/10-90.1
  • Curtis, N., Dawes, C. & Pierce, S. (2008) Phylogenetic analysis of the large subunit rubisco gene supports the exclusion of Avrainvillea and Cladocephalus from the Udoteaceae (Bryopsidales, Chlorophyta). Journal of Phycology 44: 761-767. https://doi.org/10.1111/j.1529-8817.2008.00519.x
  • Dantas, N.P. (1994) Estudos taxonomicos dos representantes da ordem Caulerpales (Chlorophyta) da Praia de Guarajiru (Estado do Ceara- Brasil). Universidade Federal de Pernambuco, Recife, 128 pp.
  • DeWreede, R. (2006) Biomechanical properties of coenocytic algae (Chlorophyta, Caulerpales). Science Asia 1: 57-62. https://doi.org/10.2306/scienceasia1513-1874.2006.32(s1).057
  • Doyle, J.L. & Doyle, J.J. (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
  • Ellis, J. & Solander, D. (1786) The natural history of many curious and uncommon zoophytes. B White & Son London XII: 208. https://doi.org/10.5962/bhl.title.64985
  • Fama, P., Wysor, B., Kooistra, W.H.C.F. & Zuccarello, G.C. (2002) Molecular phylogeny of the genus Caulerpa (Caulerpales, Chlorophyta) inferred from chloroplast tuf A gene. Journal of Phycology 38: 1040-1050. https://doi.org/10.1046/j.1529-8817.2002.t01-1-01237.x
  • Fenical, W. & Paul, V.J. (1984) Antimicrobial and cytotoxic terpenoids from tropical green algae of the family Udoteaceae. Eleventh International Seaweed Symposium: 135-140. https://doi.org/10.1007/978-94-009-6560-7_20
  • Flora do Brasil (2020) Jardim Botanico of Rio de Janeiro. Available from: http://floradobrasil.jbrj.gov.br/reflora/floradobrasil/FB99286 (accessed 17 July 2022)
  • Freshwater, D.W., Fredericq, S., Butler, S.B., Hommersand, M.H. & Chase, M.W. (1994) A gene phylogeny of the red algae (Rhodophyta) based on rbc L. Proceedings of National Academy of Sciences of the United States of America 91: 7281-7285. https://doi.org/10.1073/pnas.91.15.7281
  • Folmer, F., Jaspars, M., Dicato, M. & Diederich, M. (2010) Photosynthetic marine organisms as a source of anticancer compounds. Phytochemistry Reviews 9: 557-579. https://doi.org/10.1007/s11101-010-9200-2
  • Freshwater, D.W. & Rueness, J. (1994) Phylogenetic relationships of some European Gelidium (Gelidiales, Rhodophyta) species, based on rbc L nucleotide sequence analysis. Phycologia 33: 187-194. https://doi.org/10.2216/i0031-8884-33-3-187.1
  • Fujisawa, T. & Barraclough, T.G. (2013) Delimiting species using single-locus data and the generalized mixed Yule coalescent approach: a revised method and evaluation on simulated data sets. Systematic Biology 62: 707-724. https://doi.org/10.1093/sysbio/syt033
  • Guimar"es, N.C.L., Reis, T.N.V. & Cocentino, A.L.M. (2008) Chlorophyta bentonicas da zona economica exclusiva do Nordeste brasileiro (REVIZEE NE-I). Insula 37: 35-52.
  • Guiry, M.D. & Guiry, G.M.E. (2022) AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. Available from: http://www.algaebase.org. (accessed 15 July 2022).
  • Gepp, A. & Gepp, E.S. (1911) The Codiaceae of the Siboga Expedition including a monograph of Flabellarieae and Udoteae Siboga-ExpeditieMonographie LXII. Leiden: E. J. Brill, pp. 1-150.
  • Haendeler, K., Wagele, H., Wahrmund, U., R¸dinger, M. & Knoop, V. (2010) Slugs' last meals: molecular identification of sequestered chloroplasts from different algal origins in Sacoglossa (Opisthobranchia, Gastropoda). Molecular Ecology Resources 10: 968-978. https://doi.org/10.1111/j.1755-0998.2010.02853.x
  • Howe, M.A. (1904) Notes on Bahaman algae. Bulletin of the Torrey Botanical Club 31: 91-100. https://doi.org/10.2307/2478494
  • Howe, M.A. (1928) Notes on some marine algae from Brazil and Barbados. Journal of the Washington Academy of Sciences 18: 186- 194.
  • Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S. & Duran, C. (2012) Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647-1649. https://doi.org/10.1093/bioinformatics/bts199
  • Kooistra, W. (2002) Molecular phylogenies of Udoteaceae (Bryopsidales, Chlorophyta) reveal non monophyly for Udotea, Penicillus and Chlorodesmis. Phycologia 41: 453-462. https://doi.org/10.2216/i0031-8884-41-5-453.1
  • K¸tzing, F.T. (1843) Phycologia general isoder Anatomie, Physiologie und Systemkunde der Tange. Leipzig: Brockhaus, F. A. https://doi.org/10.5962/bhl.title.4746
  • Lagourgue, L., Puillandre, N. & Payri, C.E. (2018) Exploring the Udoteaceae diversity (Bryopsidales, Chlorophyta) in the Caribbean region based on molecular and morphological data. Molecular Phylogenetics and Evolution 127: 758-769. https://doi.org/10.1016/j.ympev.2018.06.023
  • Lagourgue, L. & Payri, C.E. (2020) Large-scale diversity reassessment, evolutionary history, and taxonomic revision of the green macroalgae family Udoteaceae (Bryopsidales, Chlorophyta). Journal of Systematics and Evolution 60: 101-127. https://doi.org/10.1111/jse.12716
  • Lam, D.W. & Zechman, F.W. (2006) Phylogenetic analyses of the Bryopsidales (Ulvophyceae, Chlorophyta) based on Rubisco large subunit gene sequences. Journal of Phycology 42: 669-678. https://doi.org/10.1111/j.1529-8817.2006.00230.x
  • Lamarck, J.B.P.A. (1813) Sur les polypiers empates. Annales du Museum d'Histoire Naturelle 20: 294-312, 370-386, 432-458.
  • Lamouroux, J.V.F. (1812) Extrait d'un memoire sur la classification des Polypiers coralligenes non entierement pierreux. Nouveaux Bulletin des Sciences, par la Societe Philomathique de Paris 3: 181-188.
  • Littler, D.S. & Littler, M. (1990) Systematics of Udotea species (Bryopsidales, Chlorophyta) in the tropical western Atlantic. Phycologia 29: 206-252. https://doi.org/10.2216/i0031-8884-29-2-206.1
  • Littler, D.S. & Littler, M. (2000) Caribbean Reef Plants. OffShore Graphics, Washington, pp. 422-434.
  • Montagne, J.F.C. (1842) Prodromus generum specierumque phycearum novarum, in itinere ad polum antarcticum...ab illustri Dumont d'Urville peracto collectarum, notis diagnosticis tantum huc evulgatarum, descriptionibus vero fusioribus nec non iconibus analyticis iam iamque illustrandarum. Paris: apud Gide, editorem. pp. 1-16.
  • Minh, B.Q., Nguyen, M.A.T. & von Haeseler, A. (2013) Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution 30: 1188-1195. https://doi.org/10.1093/molbev/mst024
  • Nakatsu, T., Ravi, B.N. & Faulkner, D.J. (1981) Antimicrobial constituents of Udotea flabellum. The Journal of Organic Chemistry 46 (12): 2435-2438. https://doi.org/10.1021/jo00325a001
  • Nguyen, L.T., Schmidt, H.A., Haeseler, A.V. & Minh, B. (2015) Q. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution 32: 268-274. https://doi.org/10.1093/molbev/msu300
  • Oliveira-Carvalho, M.F., Pereira, S.M.B. & Zickel, C.S. (2003) Floristica e distribuic"o espaco-temporal das cloroficeas bentonicas em trechos recifais do litoral norte do estado de Pernambuco, Brasil. Hoehnea 30: 201-202.
  • Oliveira, M.G.T., Pereira, S.M.B., Benko-Isepon, A.M., Balbino, V.Q., Silva Junior, W.J., Oliveira Carvalho, M.F.O. & Cassano, V. (2020) First molecular analysis of the genus Bryopsis (Bryopsidales, Chlorophyta) from Brazil, with an emphasis on the Pernambuco coast. Acta Botanica Brasilica 35: 161 -178. https://doi.org/10.1590/0102-33062020abb0154
  • Pereira, S.M.B. (1974) Cloroficeas marinhas da Ilha de Itamaraca e Arredores. Universidade de S"o Paulo, S"o Paulo. 184 pp.
  • Pereira, S.M.B. & Accioly, M.C. (1998) Cloroficeas Bentonicas da Praia de Serrambi, Pernambuco, Brasil. Acta Botanica Brasilica 12: 25-52. https://doi.org/10.1590/S0102-33061998000100003
  • Pereira, S.M.B., Oliveira-Carvalho, M.F., Angeiras, J.A.P., Pedrosa-Pedrosa, M.E., Oliveira, N.M.B., Torres, J. Gestinari, L.M.S., Cocentino,A.L.M, Santos, M.D., Nascimento, P.R. & Cavalcanti, D.R. (2002) Algas marinhas bentonicas do Estado de Pernambuco. v. 1. Recife, Diagnostico da Biodiversidade de Pernambuco, pp. 97-124.
  • Pereira, S.M.B., Ribeiro, F.A. & Bandeira-Pedrosa, M.E. (2007) Algas pluricelulares do infralitoral da praia de Gaibu (Pernambuco-Brasil). Revista Brasileira de Biociencias 5: 951-953.
  • Pereira, S.M.B., Moura, C.W.N., Gestinari, L.M.S., Bandeira-Pedrosa, M.E., Alves, A.M., Santos, A.A., Alves, G.L., Oliveira, I.S., Oliveira, I.B., Moniz-Brito, K.L., Oliveira-Carvalho, M.F., Andrade, N.A., Freitas, N.S. & Brayner-Barros, S. (2011) Taxonomia das clorofitas marinhas. In: Pedrini, A.G. (Org.) (2011) Macroalgas (Chlorophyta) e gramas (Magnoliophyta) marinhas do Brasil. Techinical Books, Rio de Janeiro, pp. 41-99.
  • Pereira, S.M.B., Torres, J. & Gestinari, L.M.S. (2014) Composition and Distribution of Deep Water Macroalgae Species from the Continental Shelf of Sergipe State, Brazil. Phytotaxa 190: 250-267. https://doi.org/10.11646/phytotaxa.190.1.15
  • Pons, J., Barraclough, T.G., Gomez-Zurita, J., Cardoso, A., Duran, D.P., Hazell, S., Kamoun, S., Sumlin, W.D. & Vogler, A.P. (2006) Sequence-based species delimitation for the DNA taxonomy of undescribed insects. Systematic Biology 55: 595-609. https://doi.org/10.1080/10635150600852011
  • Puillandre, N., Lambert, A., Brouillet, S. & Achaz, G. (2012) ABGD, automatic barcode gap discovery for primary species delimitation. Molecular Ecology 21: 1864-1877. https://doi.org/10.1111/j.1365-294X.2011.05239.x
  • Puillandre, N., Brouillet, S. & Achaz, G. (2020) ASAP: Assemble Species by Automatic Partitioning. Molecular Ecology Resources 21: 609-620. https://doi.org/10.1111/1755-0998.13281
  • Rambaut, A., Rasmussen, D., Siveroni, I., Suchard, M.A., Wu, C.-H., Xie, D., Zhang, C., Stadler, T. & Drummond, A.J. (2019) BEAST 2.5: an advanced software platform for Bayesian evolutionary analysis. PLoS Computational Biology 15: e1006650. https://doi.org/10.1371/journal.pcbi.1006650
  • Ries, J.B. (2009) Aragonite production in calcite seas: effect of seawater Mg/Ca ratio on the calcification and growth of the calcareous alga Penicillus capitatus. Paleobiology 31: 445-458. https://doi.org/10.1666/0094-8373(2005)031[0445:APICSE]2.0.CO;2
  • Rocha, M.C.B.S. (2016) Taxonomia e distribuicao do genero Udotea J V Lamour. (Bryopsidales, Chlorophyta) no litoral brasileiro. Universidade Federal Rural de Pernambuco, Recife. 76 pp.
  • Santos, G.N. & Nunes, J.M.C. (2014) Udoteaceae (Bryopsidales, chlorophyta) no litoral do estado da Bahia, Brasil. Sitientibus serie Ciencias Biologicas 436: 14-21. https://doi.org/10.13102/scb436
  • Saunders, G.W. & Kucera, H. (2010) An evaluation of rbc L, tuf A, UPA, LSU and ITS as DNA barcode markers for the marine green macroalgae. Cryptogamie, Algologie 31: 487-528.
  • Sauvage, T., Ballantine, D.L., Peyton, K.A., Wade, R.M., Sherwood, A.R., Keeley, S. & Smith, C. (2020) Molecular confirmation and morphological reassessment of Udotea geppiorum (Bryopsidales, Chlorophyta) with ecological observations of mesophotic meadows in the Main Hawaiian Islands. European Journal of Phycology 55: 186-196. https://doi.org/10.1080/09670262.2019.1668061
  • Sissini, M., Oliveira, M.C., Horta, P.A. & Pellizzari, F.M. (2017) Macroalgas da Ilha da Trindade. In: Secretaria da Comiss"o Interministerial para os Recursos do Mar - SECIRM. (Org.) PROTRINDADE: programa de pesquisas cientificas na Ilha de Trindade. 10 anos de pesquisas (SECIRM). Vol. 1. SECIRM, Brasilia, pp. 99-108.
  • Swofford, D.L. (2002) PAUP*. Phylogenetic analysis using parsimony (and other methods), version, 4, b10. Sunderland, MA, USA, Sinauer Associates.
  • Tamura, K. & Nei, M. (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution 10: 512-526.
  • Torrano-Silva, B.N. & Oliveira, E.C. (2013) Macrophytobenthic flora of the Abrolhos Archipelago and the Sebasti"o Gomes Reef, Brazil. Continental Shelf Research 70: 150-158. https://doi.org/10.1016/j.csr.2013.09.019
  • Verbruggen,H., Ashworth, M., LoDuca, S.T., Vlaeminck, C., Cocquyt, E., Sauvage, T., Zechman, F.W., Littler, D.S., Littler, M.M., Leliaert, F. & De Clerck, O. (2009) A multilocus time-calibrated phylogeny of the siphonous green algae. Molecular Phylogenetics and Evolution 50: 642-653. https://doi.org/10.1016/j.ympev.2008.12.018
  • Villaca, R., Pedrini, A.G., Pereira, S.M.B. & Figueiredo, M.D.O. (2006) Flora marinha bentonica das ilhas oceanicas brasileiras. In: Ilhas Oceanicas Brasileiras da Pesquisa ao Manejo. Ministerio do Meio Ambiente, Brasilia, pp. 105-146.
  • Wynne, M.J. (2017) A checklist of benthic marine algae of the tropical and subtropical western Atlantic: fourth revision. Nova Hedwigia Beihefte 145: 1-202.
  • Ximenes, C.F., Cassano, V., Oliveira-Carvalho, M.F., Gurgel, C.F.D., Verbruggen, H. & Pereira, S.M.B. (2017) Systematics of the genus Halimeda (Bryopsidales, Chlorophyta) in Brazil including the description of Halimeda jolyana sp.nov. Phycologia 56: 369-381. https://doi.org/10.2216/16-77.1
  • Yoneshigue-Valentin, Y, Gestinari, L.M.S. & Fernandes, D.R.P. (2006) Macroalgas da Plataforma Continental de Salvador (estado da Bahia) ao Cabo de S"o Tome (norte do estado do Rio de Janeiro), Brasil. In: Lavrado, H.P. & Ignacio, B.L. (Eds.) Biodiversidade bentonica da regiao central da Zona Economica Exclusiva brasileira. Museu Nacional (Serie Livros n. 18), Rio de Janeiro, pp. 67-105.
  • Zhang, J., Kapli, R., Pavlidis, P. & Stamatakis, A. (2013) A general species delimitation method with applications to phylogenetic placements. Bioinformatics, Advance Access 29: 2869-2876. https://doi.org/10.1093/bioinformatics/btt499