Published December 19, 2022 | Version v0
Dataset Open

CAbiNet: Joint visualization of cells and genes based on a gene-cell graph

  • 1. Max Planck Institute for Molecular Genetics

Contributors

Contact persons:

Project leader:

  • 1. Max Planck Institute for Molecular Genetics

Description

We here provide the data sets to reproduce the results in our manuscript 'CAbiNet: Joint visualization of cells and genes based on a gene-cell association graph'. The code to reproduce our analysis with the data sets provided here can be found at: https://github.com/VingronLab/CAbiNet_paper.

You can find three types of data here: raw data, preprocessed data, and benchmarking results.

Tips for downloading the data:

- If you want to reproduce all the results in our paper from the beginning to the end, please download the rawdata.zip and disscussed_data.zip . Then you can go through our codes.

- If you only want to reproduce the figures shown in the paper, please download the discussed_data.zip and benchmarking.zip.

 

Files

benchmarking.zip

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