Published September 20, 2024 | Version v4

Dataset - Papyrus - A large scale curated dataset aimed at bioactivity predictions

Description

Fixed version of additional_files:

- In the previous version of 05.6_additional_files the data type of some descriptors was assigned incorrectly

- In this fixed version data types are correct 

This repository contains version 05.6 of the Papyrus dataset, an aggregated dataset of small molecule bioactivities, as described in the article "Papyrus - A large scale curated dataset aimed at bioactivity predictions" doi.org/10.1186/s13321-022-00672-x.

Changes compared to version 05.5

- applied small molecule filter that filters out compounds with a MW < 200 or > 800, heavy metal containing compounds and mixtures

- include TID column which contains information on the original protein identifier

Files

05.6_additional_files.zip

Files (13.3 GB)

Name Size
md5:bf66a2cc289a87115c95ac043cffd557
31.1 MB Download
md5:bc670be26294bcec7018b429f13d1a0e
47.5 kB Preview Download
md5:fcedda2800c6c9d8fd606b0e1d4525c4
2.1 GB Download
md5:4d647397b89b3da1690283b508e5e002
96.6 MB Download
md5:2c0c6062377ff53f9bbb7f5c23d8fc9f
1.5 GB Download
md5:18c63cf83eab57c85228851c931a74b5
3.1 GB Download
md5:102908a632d132c2ee28da2a16bf67d9
439.8 MB Download
md5:f4bdd3889a31fb9b31915f2f14dc59a7
117.1 MB Download
md5:43a5ae43bbea9fa53f61bddf14afcc45
3.3 GB Download
md5:7edb808331eda39be4cfff73675e8d28
500.1 MB Download
md5:27e4ffbb999e1d20c5cb852c97b1f0a1
447.8 MB Download
md5:0d4c234b0b4955fb7ff665611341b366
207.1 MB Download
md5:b0f62a23923a4741d651811818fc94ac
1.9 MB Download
md5:31bc7c86adc7ff3c35a18a0b79397440
711.5 MB Download
md5:536983256a3ad5ac45822eacc63acc6f
744.4 MB Download
md5:b75d37e2c813fb8b3df73e33feb31097
12.8 kB Preview Download

Additional details

Related works

Is cited by
Preprint: 10.26434/chemrxiv-2021-1rxhk (DOI)
Is described by
Presentation: 10.5281/zenodo.6771177 (DOI)
Journal article: 10.1186/s13321-022-00672-x (DOI)
Is new version of
Dataset: 10.5281/zenodo.7019874 (DOI)
Dataset: 10.4121/16896406.v3 (DOI)

Funding

European Commission
eTRANSAFE - Enhacing TRANslational SAFEty Assessment through Integrative Knowledge Management 777365