Published November 17, 2022 | Version v1
Journal article Restricted

Strobilanthes glandulata (Acanthaceae), a new species from Sri Lanka based on the morphological and molecular evidences

  • 1. Department of Wildlife Conservation, Battaramulla 10120, Sri Lanka & Post Graduate Institute of Science, University of Peradeniya, Peradeniya 20400, Sri Lanka & nilanthi.dwc@gmail.com; https://orcid.org/0000-0002-8398-541X
  • 2. Agriculture Biotechnology Centre, Faculty of Agriculture, University of Peradeniya, Peradeniya 20400, Sri Lanka & hirunas@eng.pdn.ac.lk; https://orcid.org/0000-0002-5812-1046
  • 3. Department of Wildlife Conservation, Battaramulla 10120, Sri Lanka & chathuranga.nuwan.ka@gmail.com; https://orcid.org/0000-0002-8273-3050
  • 4. Agriculture Biotechnology Centre, Faculty of Agriculture, University of Peradeniya, Peradeniya 20400, Sri Lanka & bhagya.hathurusinghe93@gmail.com; https://orcid.org/0000-0002-0816-2501
  • 5. National Institute of Fundamental Studies, Hantane Road, Kandy 20000, Sri Lanka & siril.wi@nifs.ac.lk; https://orcid.org/0000-0002-6754-8201
  • 6. Agriculture Biotechnology Centre, Faculty of Agriculture, University of Peradeniya, Peradeniya 20400, Sri Lanka & pradeepag@agri.pdn.ac.lk, pgunathilake@ucdavis.edu; https://orcid.org/0000-0001-8241-1775

Description

Nilanthi, Rajapakse Mudiyanselage Renuka, Samarakoon, Hiruna, Jayawardana, Nuwan, Hathurusinghe, Bhagya, Wijesundara, Siril, Bandaranayake, Pradeepa Chandani Gunathilake (2022): Strobilanthes glandulata (Acanthaceae), a new species from Sri Lanka based on the morphological and molecular evidences. Phytotaxa 573 (1): 1-14, DOI: 10.11646/phytotaxa.573.1.1, URL: http://dx.doi.org/10.11646/phytotaxa.573.1.1

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

References

  • Abramoff, M.D., Magalhaes, P.J. & Ram, S.J. (2004) Image processing with image J. Biophotonics International 11: 36-42.
  • Alexiades, M.N. (1996) Collecting ethnobotanical data: an introduction to basic concepts and techniques. Advances in Economic Botany 10: 53-94.
  • Blume, C.L. (1826) Bijdragen tot de Flora van Nederlandsch Indie 14. Batavia. Ter Lands Drukkerij, Batavia, 781 pp. https://doi.org/10.5962/bhl.title.395
  • Bremekamp, C.E.B. (1944) Materials for a monograph of the Strobilanthinae (Acanthaceae).Verhandelingen der Koninklijke Nederlandsche Akademie van Wetenschappen. Afdeeling Natuurkunde. Tweede Sectiet. 41: 1-305.
  • Carine, M.A. & Scotland, R.W. (1998) Pollen morphology of Strobilanthes blume (acanthaceae) from southern India and Sri lanka. Review of Palaeobotany and Palynology 103 (3-4): 143-165. https://doi.org/10.1016/S0034-6667(98)00030-X
  • Carine, M.A. & Scotland, R.W. (2002) Classification of Strobilanthinae (Acanthaceae): trying to classify the unclassifiable? Taxon 51: 259-279. https://doi.org/10.2307/1554897
  • Carine, M.A., Jayasekara, P. & Scotland, R.W. (2000) A new species of Strobilanthes Blume (Acanthaceae) from Sri Lanka. Kew Bulletin 55 (4): 971-976. https://doi.org/10.2307/4113644
  • Chen, H.M., Shao, J.J., Zhang, H., Jiang, M., Huang, L.F., Zhang, Z., Yang, D., He, M., Ronaghi, M., Luo, X., Sun, B.T., Wu, W.W & Liu, C. (2018) Sequencing and analysis of Strobilanthes cusia (Nees) Kuntze chloroplast genome revealed the rare simultaneous contraction and expansion of the inverted repeat region in angiosperm. Frontiers in plant science 9: 324. https://doi.org/10.3389/fpls.2018.00324
  • Chen, F.L., Deng, Y.F., Xiong, Z.B. & Ran, J.C. (2019) Strobilanthes hongii, a new species of Acanthaceae from Guizhou, China. Phytotaxa 388 (1): 135-144. https://doi.org/10.11646/phytotaxa.388.1.7
  • Dierckxsens, N., Patrick, M. & Guillaume, S. (2017) NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Research 45 (4): e18. https://doi.org/10.1093/nar/gkw955
  • Du, L.M., Zhang, C., Liu, Q., Zhang, X.Y. & Yue, B.S. (2018) Krait: an ultrafast tool for genome-wide survey of microsatellites and primer design. Bioinformatics 34 (4): 681-683. https://doi.org/10.1093/bioinformatics/btx665
  • Eguiluz, M., Rodrigues, N.F., Guzman, F., Yuyama, P. & Margis, R. (2017) The chloroplast genome sequence from Eugenia uniflora, a Myrtaceae from Neotropics. Plant Systematics and Evolution 303 (9): 1199-1212. https://doi.org/10.1007/s00606-017-1431-x
  • Erdtman, G. (1986) Pollen morphology and plant taxonomy: angiosperms. Brill Archive.
  • Greiner, S., Lehwark, P. & Bock, R. (2019) OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Research 47 (W1): W59-W64. https://doi.org/10.1093/nar/gkz238
  • Huotari, T. & Korpelainen, H. (2012) Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes. Gene 508: 96-105. https://doi.org/10.1016/j.gene.2012.07.020
  • Jin, J.J., Yu, W.B., Yang, J.B., Song, Y., dePamphilis, C.W., Yi, T.S. & Li, D.Z. (2020) GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology 21: 241. https://doi.org/10.1186/s13059-020-02154-5
  • Katoh, K. & Standley, D.M. (2013) MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Molecular Biology and Evolution 30 (4): 772-780. https://doi.org/10.1093/molbev/mst010
  • Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C. & Thierer, T. (2012) Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28 (12): 1647-1649. https://doi.org/10.1093/bioinformatics/bts199
  • Ma, J., Yang, B.X., Zhu, W., Sun, L.L., Tian, J.K. & Wang, X.M. (2013) The complete chloroplast genome sequence of Mahonia bealei (Berberidaceae) reveals a significant expansion of the inverted repeat and phylogenetic relationship with other angiosperms. Gene 528: 120-131. https://doi.org/10.1016/j.gene.2013.07.037
  • Mabberley, D.J. (2017) Mabberley's Plant-book: a portable dictionary of plants, their classification and uses. 4th edition. Cambridge University Press, Cambridge, 1102 pp. https://doi.org/10.1017/9781316335581
  • McKain, M.R. & Wilson, M. (2017) Fast-Plast: rapid de novo assembly and finishing for whole chloroplast genomes. Version 1.2.6. [https://github.com/mrmckain/Fast-Plast]
  • Nees von Esenbeck, C.G. (1832) Acanthaceae Indiae orientalis. In: Wallich, N. (ed.) Plantae Asiaticae rariores 3. Treuttel, Wurtz & Ritter, London, pp. 70-117.
  • Nilanthi, R.M.R., Samarakoon, H., Jayawardana, N., Wijesundara, S. & Bandaranayake, P.C.G. (2021) Strobilanthes medahinnensis (Acanthaceae) a new species, based on morphological and molecular data, from the Peak Wilderness Nature Reserve, Sri Lanka. Phytotaxa 514 (1): 26-38. https://doi.org/10.11646/phytotaxa.514.1.2
  • Raczy, C., Petrovski, R., Saunders, C.T., Chorny, I., Kruglyak, S. & Margulies, E.H. (2013) Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms. Bioinformatics 29: 2041-2043. https://doi.org/10.1093/bioinformatics/btt314.
  • Rozas, J., Ferrer-Mata, A., Sanchez-DelBarrio, J.C., Guirao-Rico, S., Librado, P., Ramos-Onsins, S.E. & Sanchez-Gracia, A. (2017) DnaSp 6: DNA sequence polymorphism analysis of large datasets. Molecular Biology and Evolution 34 (12): 3299-3302. https://doi.org/10.1093/molbev/msx248
  • Shinozaki, K., Ohme, M., Tanaka, M., Wakasugi, T., Hayshida, N., Matsubayasha, T. & Sugiura, M. (1986) The complete nucleotide sequence of the tobacco chloroplast genome. Plant Molecular Biology Reporter 4 (3): 111-148. https://doi.org/10.1007/BF02669253
  • Thomas, S., Mani, B., Britto, S.J. & Pradeep, A.K. (2020) A new species of Strobilanthes (Acanthaceae) from the Western Ghats, India. Taiwania 65: 167-171. https://doi.org/10.14719/pst.2020.7.1.627
  • Tillich, M., Lehwark, P., Pellizzer, T., Ulbricht-Jones, E.S., Fischer, A., Bock, R. & Greiner, S. (2017) GeSeq-versatile and accurate annotation of organelle genomes. Nucleic Acids Research 45 (W1): W6-W11. https://doi.org/10.1093/nar/gkx391
  • Vahl, M. (1794) Symbolae Botanicae. 3. Moller, Copenhagen, pp. 51-75.
  • Venu, P. (2006) Strobilanthes Blume (Acanthaceae) in Peninsular India. Botanical Survey of India, Kolkata, 216 pp.
  • Walker, J.W. & Doyle, J.A. (1975) The Bases of Angiosperm Phylogeny: Palynology. Annals of the Missouri Botanical Garden 62 (3): 664-723. https://doi.org/10.2307/2395271
  • Wood, J.R.I. & Scotland, R.W. (2009) New and little-known species of Strobilanthes (Acanthaceae) from India and South East Asia. Kew Bulletin 64: 3-47. https://doi.org/10.1007/s12225-009-9098-2
  • Wood, J.R.I. (1994) Notes relating to the flora of Bhutan: XXIX. Acanthaceae, with special reference to Strobilanthes. Edinburgh Journal of Botany 51 (2): 175-273. https://doi.org/10.1017/S0960428600000871
  • Wood, J.R.I. (1995) Notes on Strobilanthes for the flora of Ceylon. Kew Bulletin 50 (1): 1-24. https://doi.org/10.2307/4114605.
  • Wood, J.R.I. (1998) Strobilanthes. In: Dassanayake, M.D. (ed.) A revised handbook to the flora of Ceylon XII. A.A Balkema, Rotterdam, pp. 30-74.
  • Wood, J.R.I. (2014) New names and combinations in Indian Acanthaceae Novon: A Journal for Botanical Nomenclature 23 (3): 385- 395. https://doi.org/10.3417/2013046
  • Wood, J.R.I., Borah, D. & Taram, M. (2021) The rediscovery of Strobilanthes tubiflos (Acanthaceae) in north east India. Kew Bulletin 76: 333-338. https://doi.org/10.1007/s12225-021-09935-6