Published February 4, 2023 | Version 1.0
Dataset Open

Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic

Creators

  • 1. Leibniz Institute for Natural Product Research and Infection Biology
  • 2. ROR icon Max Planck Institute for Evolutionary Anthropology
  • 3. ROR icon Friedrich Schiller University Jena
  • 4. ROR icon Universidad de Cantabria
  • 5. ROR icon University of New Mexico
  • 6. ROR icon Harvard University

Description

De novo assembly of ancient metagenomes to reconstruct biosynthetic machinery and access Pleistocene bacterial metabolites. This Zenodo archive belongs to the following publication (DOI: 10.1126/science.adf5300):

Klapper, M., Hübner, A., Ibrahim A. et al. Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic. Science 380, 619–624 (2023).

This Zenodo archive contains the GitHub repository Paleobiotechnology/EMN001_Paleofuran with all code and and data used for the publication mentioned above, as well as additional figures, huge NMR and GCMS data, which are not stored in the GitHub repository but have been deposited in this long-term Zenodo archive (see directory tree below).

All datasets and scripts required for the project analysis can be found in this directory: 
├── GCMS.tar.gz
├── github.tar.gz
├── licenses.tar.gz
├── MS_figures.tar.gz
└── NMR.tar.gz

Files

Files (1.3 GB)

Name Size Download all
md5:781bb3179c4d956afcf5c07b6d47fd3b
1.3 GB Download

Additional details

Dates

Submitted
2022-10-28
Accepted
2023-04-13
Issued
2023-05-04
Vol 380, Issue 6645 pp. 619-624

Software

Repository URL
https://github.com/paleobiotechnology/EMN001_Paleofuran