Published July 5, 2022 | Version v3
Dataset Restricted

Biosurfer data files for analysis

Authors/Creators

  • 1. University of Virginia

Description

This repository contains data used for running Biosurfer, a tool to surf the biological network, from genome to transcriptome to proteome and back to gain insights into human disease biology.

  1. The first zip file (biosurfer_gencode_toy_data.zip) is a small subset of the GENCODE Human version 38 for the purpose of trial run and testing.
  2. The second zip file (biosurfer_gencode_v41_data.zip) contains GENCODE Human version 41.
  3. The third zip file (biosurfer_gencode_v42_data.zip) contains GENCODE Human version 42.
  4. The fourth zip file (biosurfer_wtc11_data.zip) contain karyotypically normal human stem cell line data (WTC11).

Files

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