anilpsori/DNAm_pipelines_and_biomarkers: Analysis code of DNAm data preprocessing and normalization strategies and implementation of DNAm predictors
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Description
This release contains programming code written in the R language to implement 101 DNAm data preprocessing and normalization strategies as well as various DNAm predictors. These analytical strategies and predictors were implemented as part of a systematic evaluation of DNA methodology and the performance of DNAm predictors (see reference to preprint below).
A systematic evaluation of 41 DNA methylation predictors across 101 data preprocessing and normalization strategies highlights considerable variation in algorithm performance: https://www.biorxiv.org/content/10.1101/2021.09.29.462387v1
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anilpsori/DNAm_pipelines_and_biomarkers-v1.0.zip
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(144.9 kB)
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Related works
- Is supplement to
- https://github.com/anilpsori/DNAm_pipelines_and_biomarkers/tree/v1.0 (URL)