Published September 16, 2022
| Version 1.1
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.1.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
- genomad_hmm_v1.1.tar.gz: HMMER HMM models.
- genomad_metadata_v1.1.tsv.gz: Metadata for all the 227,897 markers.
- genomad_msa_v1.1.tar.gz: Multiple sequence alignments in FASTA format.