ICB Data TSV Files
Description
ICB data objects extracted into TSV files.
Processed by using this script: https://github.com/bhklab/icb_data_exploration_and_analysis/blob/main/Code/rds_to_tsv.R.
Information about each data object is available at https://www.orcestra.ca/clinical_icb.
Each zip file contains
- patient metadata ICB_[Study]_metadata.tsv
- assay data ICB_[Study]_[Assay Name].tsv
- assay gene metadata ICB_[Study]_[Assay Name]_genes.tsv
The Assay Name can be "expr", "expr_gene_tpm", "expr_gene_counts", "expr_isoform_tpm", "expr_isoform_counts".
"expr" and "expr_gene_tpm" are gene expression data in TPM, which is present across all datasets.
Other assay data are present if raw gene expression data were available.
Files
ICB_Braun.zip
Files
(740.7 MB)
Name | Size | Download all |
---|---|---|
md5:58a69c07bbfde569e99450467725c794
|
31.5 MB | Preview Download |
md5:0925458690db34e227b0e6542312604a
|
128.5 MB | Preview Download |
md5:1def51e71b82752b7c64c0e38e4fae59
|
100.7 MB | Preview Download |
md5:1bd15d0bd9ac944853cd49f0b4cd6c31
|
83.9 kB | Preview Download |
md5:3eadbdd26294aace9c7b41f1bd001ad2
|
520.8 kB | Preview Download |
md5:e45cff3df29e0cc5126428a6185f4538
|
90.6 MB | Preview Download |
md5:8ec1669e80c0f365172982ff39f8f6ca
|
134.3 MB | Preview Download |
md5:cd8147db6ae981c929144a7a82d35272
|
18.2 MB | Preview Download |
md5:6433d14770580f91d0449e6fabc467cc
|
49.8 MB | Preview Download |
md5:9fdb0d89c6725410db09bad4d06a27f1
|
6.4 MB | Preview Download |
md5:adca31d27b3e8f978c9667821ba89d4e
|
7.9 MB | Preview Download |
md5:e63a4876fb2252dbfb5a36590f6fdb4f
|
7.7 MB | Preview Download |
md5:077623eefae7098cb3ac13ded15dae0f
|
7.6 MB | Preview Download |
md5:8bfb33a25165d30c674b7007cc143c32
|
133.7 MB | Preview Download |
md5:d97df965ae6ccc60e8abe2890510892f
|
103.0 kB | Preview Download |
md5:f2f6c86edb11e2ee725d8445aff50748
|
2.5 MB | Preview Download |
md5:55ca2e0e758340456c455b147a68eb84
|
7.3 MB | Preview Download |
md5:4f0c4e471894ba66cba10e24d7be81a1
|
7.9 MB | Preview Download |
md5:09842c5d751ba4139bf34c0f7744fcc8
|
5.4 MB | Preview Download |