Published June 29, 2022
| Version 1.0.2
Dataset
Open
Octopus bimaculoides genome assembly
Authors/Creators
- 1. University of Oregon, Institute of Neuroscience
- 2. University of Oregon, Institute of Ecology and Evolution
Description
To facilitate identification of molecular cell types in the Octopus bimaculoides optic lobe, we conducted high fidelity long-read genomic and transcriptomic sequencing. Here, we provide open access to these datafiles, which resulted in a single-cell atlas of the O. bimaculoides visual system (https://doi.org/10.1101/2022.06.11.495763). Below, we include a new genome assembly and annotation, phylogenetic trees for genes referenced in the preprint, and Cell Ranger outputs. Raw single-cell sequence files will be uploaded to NCBI’s SRA. If any of these files are used, we ask that the pre-print is cited. We will update this depository with citation information when our manuscript is published.
Notes
This work was supported by National Institutes of Health R01NS118466-01 (C.M.N.) and R01NS118466-01S1 (C.M.N., J.O.SC.), Office of Naval Research N00014-21-1-2426 (C.M.N.), University of Oregon Renee James Seed Grant (A.C.M., C.M.N), National Science Foundation Graduate Research Fellowship Grant No. 1842486 (G.C.C.), and R01HG010774 (A.D.K).
Files
o_bimaculoides_hifi_v1.0.2.zip
Files
(6.0 GB)
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