Preserved Specimen Records with Still Images Registered Across Biodiversity Data Networks in Period 2019-2022 hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86

Natural History Collections keep physical specimen of organisms. Some of these collections provide digital catalogs. These digital catalogs may be registered with, and tracked by, digital registries like Global Biodiversity Information Facility (GBIF, https://gbif.org), Integrated Digitized Biocollections (iDigBio, https://idigbio.org), and the Biological Collection Access Service (BioCASe, https://biocase.org).

This publication reports on the availability of registered preserved specimen records with at least one associated image (i.e. StillImage) over period 2019/2022. 

For a description of the methods, see:

Jorrit Poelen. (2022). jhpoelen/specimen-image-index: 0.0.1 (0.0.1). Zenodo. https://doi.org/10.5281/zenodo.7032668

The associated provenance log identifiers include:

hash://sha256/251fa349c051bbda370decb7e5e58960d702add59f6e131ebf7c960d0f93b417
hash://sha256/261177a96185166f1c301beacf7350abff03d1b5710be6bfd8c4aff9caffef12
hash://sha256/8ff46ae6a30bf9647df0294b92434a83784626b3f8c37163db3edefb049daead
hash://sha256/9a41d2583f0b8169ffdd44fb2d3a5e057eba4a10e5d9193d0c6e9dcf07c3119e
hash://sha256/b9864a749112cad2fe19e62bf5d8bad580a7036d363d16d81d5c16be325fa0fd
hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86

where the hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86 is cryptographically linked to the others. 

For completeness, the associated provenance logs are included using their hex hashes as file attached to this publication:

251fa349c051bbda370decb7e5e58960d702add59f6e131ebf7c960d0f93b417
261177a96185166f1c301beacf7350abff03d1b5710be6bfd8c4aff9caffef12
8ff46ae6a30bf9647df0294b92434a83784626b3f8c37163db3edefb049daead
9a41d2583f0b8169ffdd44fb2d3a5e057eba4a10e5d9193d0c6e9dcf07c3119e
b9864a749112cad2fe19e62bf5d8bad580a7036d363d16d81d5c16be325fa0fd
da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86

Other files include, suffixed by the first four hex characters of their associated provenance log id:

# this file  
README

# identifiers of tracked content captured in associated provenance logs.
content_251f.tsv
content_2611.tsv
content_8ff4.tsv
content_9a41.tsv
content_b986.tsv
content_da74.tsv

# identifiers of tracked content said to contain multimedia
content-with-multimedia_251f.tsv
content-with-multimedia_2611.tsv
content-with-multimedia_8ff4.tsv
content-with-multimedia_9a41.tsv
content-with-multimedia_b986.tsv
content-with-multimedia_da74.tsv

# identifiers of tracked content said to contain multimedia and still images
content-with-still-images_251f.tsv
content-with-still-images_2611.tsv
content-with-still-images_8ff4.tsv
content-with-still-images_9a41.tsv
content-with-still-images_b986.tsv
content-with-still-images_da74.tsv

# identifiers of tracked content said to contain multimedia, still images, and specimen
content-with-still-images-and-specimen_251f.tsv
content-with-still-images-and-specimen_2611.tsv
content-with-still-images-and-specimen_8ff4.tsv
content-with-still-images-and-specimen_9a41.tsv
content-with-still-images-and-specimen_b986.tsv
content-with-still-images-and-specimen_da74.tsv

# reported scientificName associated with preserved specimen record with image(s)
content-name-image_251f.tsv.gz
content-name-image_2611.tsv.gz
content-name-image_8ff4.tsv.gz
content-name-image_9a41.tsv.gz
content-name-image_b986.tsv.gz
content-name-image_da74.tsv.gz

# names associated with preserved specimen with images grouped in categories Plantae, Insecta and Mammalia

plantae_insecta_or_mammalia_image_251f.tsv.gz
plantae_insecta_or_mammalia_image_2611.tsv.gz
plantae_insecta_or_mammalia_image_8ff4.tsv.gz
plantae_insecta_or_mammalia_image_9a41.tsv.gz
plantae_insecta_or_mammalia_image_b986.tsv.gz
plantae_insecta_or_mammalia_image_da74.tsv.gz

# associated discussions

github_bio-guoda_preston_issues_168-2022-08-29.txt
github_jhpoelen_specimen-image-index_issues_1-2022-08-29.txt

# associated processing scripts

make-all.sh
make.sh
has-multimedia.sh
extract-still-image-records.sh
has-still-image.sh
extract-preserved-specimen-records.sh
has-specimen.sh
create-named-specimen-with-image-table.sh