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Published August 15, 2022 | Version 1.0
Dataset Open

geNomad database

Authors/Creators

  • 1. Joint Genome Institute

Description

Marker database used by geNomad for virus and plasmid identification.

  • genomad_db_v1.0.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
  • genomad_metadata_v1.0.tsv.gz: Metadata for all the 227,897 markers.
  • genomad_msa_v1.0.tar.gz: Multiple sequence alignments in FASTA format.

Files

Files (1.4 GB)

Name Size
md5:334b977228790a6856419ebc12c13f29
729.0 MB Download
md5:16145a0f9d809f45180e5de3bdf8c1cc
6.8 MB Download
md5:5669e9973090dad581053b67eee1f40d
685.7 MB Download