Published June 28, 2022
| Version v1.7.4
Software
Open
stemangiola/tidybulk: Dev Bioconductor 3.16
Authors/Creators
- 1. Walter and Eliza Hall Institute of Medical Research
- 2. @Bioconductor
- 3. Servier Pharmaceuticals
- 4. Walter and Eliza Hall Institute
Description
What's Changed
- Sparse counts by @stemangiola in https://github.com/stemangiola/tidybulk/pull/211
- Cibersort check 0 counts by @stemangiola in https://github.com/stemangiola/tidybulk/pull/217
- Update NEWS.rd by @mblue9 in https://github.com/stemangiola/tidybulk/pull/220
- Fix typo in DESeq raw result variable return by @antass in https://github.com/stemangiola/tidybulk/pull/223
- print message if reference is not defined by the user by @stemangiola in https://github.com/stemangiola/tidybulk/pull/226
- Cibersort check 0 counts by @stemangiola in https://github.com/stemangiola/tidybulk/pull/218
- Sparse counts by @stemangiola in https://github.com/stemangiola/tidybulk/pull/207
- Dev by @stemangiola in https://github.com/stemangiola/tidybulk/pull/227
- try fix by @stemangiola in https://github.com/stemangiola/tidybulk/pull/228
- Update actions to Bioc 3.14 by @mblue9 in https://github.com/stemangiola/tidybulk/pull/229
- For jian by @stemangiola in https://github.com/stemangiola/tidybulk/pull/230
- Dev by @stemangiola in https://github.com/stemangiola/tidybulk/pull/231
- add argument for scaling if not scaled by @stemangiola in https://github.com/stemangiola/tidybulk/pull/232
- Dev by @stemangiola in https://github.com/stemangiola/tidybulk/pull/233
- Update github action to Bioc 3.15 by @mblue9 in https://github.com/stemangiola/tidybulk/pull/234
- implement new vocabulary by @stemangiola in https://github.com/stemangiola/tidybulk/pull/237
- deprecate .contrasts and update tests by @stemangiola in https://github.com/stemangiola/tidybulk/pull/239
- avoid human annotation by @stemangiola in https://github.com/stemangiola/tidybulk/pull/238
- allow other feature column for SE by @stemangiola in https://github.com/stemangiola/tidybulk/pull/236
- Polish aggregation tibble by @stemangiola in https://github.com/stemangiola/tidybulk/pull/235
- implementation parallel cibersort by @stemangiola in https://github.com/stemangiola/tidybulk/pull/244
- deprecation untested by @stemangiola in https://github.com/stemangiola/tidybulk/pull/241
- Dev by @stemangiola in https://github.com/stemangiola/tidybulk/pull/242
- @antass made their first contribution in https://github.com/stemangiola/tidybulk/pull/223
Full Changelog: https://github.com/stemangiola/tidybulk/compare/v1.5.5...v1.7.4
Files
stemangiola/tidybulk-v1.7.4.zip
Files
(3.7 MB)
| Name | Size | Download all |
|---|---|---|
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md5:d4d76cf8c057c65b4e597c87c16091e3
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3.7 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/stemangiola/tidybulk/tree/v1.7.4 (URL)