CVUA-RRW/FooDMe: foodme v1.5.0

This update is not backwards compatible. A configuration file update is nescessary.

• Benchmark module is live with possibility to compare results to an expected sample composition. The benchmark module will output the comparison results and several useful metrics in an HTML report. It can be used directly for validation or parameter space exploration.

• Added the benchmarking module which can be called with snakemake benchmark
• Added required parameters in the config file
• The python wrapper is now deprecated. See the documentation on how to use configuration files.

• Added a dependency to Scikit-learn
• Updated R packages dependency in the rmarkdown environment

• Added documentation for the benchmark module