Published March 8, 2021
| Version 0.2.7
Software
Open
pyPESTO - Parameter EStimation TOolbox for python
Description
- Ensembles:
- Added standard deviation to ensemble prediction plots (#853)
- Storage
- Distinguish between scalar and vector values in Hdf5History._get_hdf5_entries (#856)
- Fix hdf5 history overwrite (#861)
- Updated optimization storage format. Made attributes explicit. (#863)
- Added problem to result from read_results_from_file (#862)
- General
- Various additions to Optimize(r)Result summary method (#859, #865, #866, #867)
- Fixed optimizer history fval offset (#834)
- Updated the profile, minimize, sample and added overwrite as argument. (#864)
- Fixed y-labels in pypesto.visualize.optimizer_history (#869)
- Created show_bounds, to display proper sampling scatter plots. (#868)
- Enabled saving messages and exit flags in hdf5 history in case of finished run (#873)
- Select: use objective function evaluation time as optimization time for models with no estimated parameters (#872)
- removed checking for equality and checking for np.allclose in test_aesara (#877)
Files
ICB-DCM/pyPESTO-v0.2.13.zip
Files
(4.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:4fdd5c467f45f05453affcf96ee1cc69
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4.4 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/ICB-DCM/pyPESTO/tree/v0.2.13 (URL)