There is a newer version of the record available.

Published May 20, 2022 | Version v0.3
Software Open

GeoEnrich v0.3: a new tool for scientists to painlessly enrich their species occurrence data with environmental variables

Authors/Creators

Description

GeoEnrich provides functionalities to enrich georeferenced events (such as species occurrences) with environmental data from satellites or models. Users can specify a geographic or temporal buffer to include data in the neighbourhood of occurrences into their analyses.

This package is intended for large numbers of occurrences: local storage is implemented to avoid redundant requests to remote servers. All downloaded environmental data are stored locally in netCDF files and can be retrieved as a summary csv file, multidimensional numpy arrays, or exported as png images.

Sea surface temperature, chlorophyll, and 40 other environmental variables are available natively, and others can easily be added by the user.

The package provides functions to retrieve occurrence data directly from GBIF, or open a custom dataset from any source. Arbitrary areas defined by the user can also be enriched.

Documentation on Read the Docs.

Files

morand-g/geoenrich-v0.3.zip

Files (1.4 MB)

Name Size Download all
md5:294b91500a4a6f478e003e2ea8f779da
1.4 MB Preview Download

Additional details

Related works

Is derived from
Software: https://github.com/morand-g/geoenrich/tree/v0.3 (URL)
Is documented by
Software documentation: https://geoenrich.readthedocs.io (URL)