Published April 27, 2022 | Version v1
Dataset Open

Sample datasets for a tool benchmark

Authors/Creators

Description

Processed single cell datasets for a tool benchmark.

Raw data was downloaded from GEO:

1) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE122960

2) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE128033

3) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE135893

4) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136831

 

Normalization procedure can be found here: https://github.com/mora-lab/cell-cell-interactions/tree/main/benchmark-workflow/R

Files

Files (2.4 GB)

Name Size
md5:daa858e41eac1a01f37df95e6cba3b0d
396.0 MB Download
md5:edb5bce0b444766dab1287bcb029a1fa
698.3 MB Download
md5:ad95bd1a89775dabb14cdb889fc4d269
283.4 MB Download
md5:3c47e613949a2ce955deb7d04afeabf0
1.0 GB Download