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Published March 14, 2022 | Version v0.7.1
Software Open

althonos/pyrodigal: v0.7.1

Authors/Creators

  • 1. EMBL, @zellerlab

Description

Changed
  • Rewrite internal Sequence code using inlined functions to increase performance when the strand is known.
Fixed
  • Nodes.copy potentially failing on empty collections after trying to allocate 0 bytes.
  • TestGenes.test_write_scores failing on some machines because of float rounding issues.
  • Gene.translate ignoring the unknown_residue argument value and always using "X".
  • Memory leak in Pyrodigal.train cause by memory not being freed after building the GC frame plot.

Files

althonos/pyrodigal-v0.7.1.zip

Files (1.2 MB)

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md5:ef6665c54b4959c4a0786298b8017351
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Additional details

Related works

Is supplement to
https://github.com/althonos/pyrodigal/tree/v0.7.1 (URL)