Published March 7, 2022 | Version v1
Dataset Open

Datasets for Background and Shading Correction of Optical Microscopy Images by BaSiCPy

Authors/Creators

  • 1. Helmholtz AI, Helmholtz Zentrum Munich, Germany

Description

This repository holds all the example data for publication: "A BaSiC tool for background and shading correction of optical microscopy images, Nature Communications (2017)" DOI: https://doi.org/10.1038/ncomms14836, and also "BaSiCPy: Scalable and Robust Shading Correction for Optical Microscopy Images". A downsampled version is available at Zenodo repository with DOI: 10.5281/zenodo.6974039.

Files

Cell_culture.zip

Files (563.5 MB)

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md5:797bbc4c891e5fe59f4200e771b55c3a
89.3 MB Preview Download
md5:460e5f78ac69856705704fedad9f9e59
151.2 MB Preview Download
md5:815d53cac35b671269b17bd627d7baa7
186.9 MB Preview Download
md5:bee97561e87c51e90b46da9b439e8b7b
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md5:6e163786ddec2a690aa4bb47a64bcded
59.8 MB Preview Download

Additional details

Related works

Is required by
Software: https://github.com/peng-lab/BaSiCPy (URL)
Is source of
Dataset: 10.5281/zenodo.6974039 (DOI)
Is supplement to
Journal article: 10.1038/ncomms14836 (DOI)