There is a newer version of the record available.

Published March 2, 2022 | Version v0.7.0
Software Open

BigDataBiology/SemiBin: Version 0.7.0

Authors/Creators

  • 1. ISTBI, Fudan university
  • 2. Fudan University
  • 3. Big Data Biology Lab

Description

Full support for Mac OS X is the big change.

Full ChangeLog:

  • Improve check_install command by printing out paths and correctly handling optionality of FragGeneScan/prodigal
  • Reuse markers.hmmout to make the training from several samples faster
  • Add option --tmpdir to set temporary directory
  • Substitute FragGeneScan with Prodigal (FragGeneScan can still be used with --orf-finder parameter)
  • Add 'concatenate_fasta' command to combine fasta files for multi-sample binning

Files

BigDataBiology/SemiBin-v0.7.0.zip

Files (45.5 MB)

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md5:6a61b55eafdf70c53d9875bbdebcc6d1
45.5 MB Preview Download

Additional details

Related works

Is supplement to
https://github.com/BigDataBiology/SemiBin/tree/v0.7.0 (URL)