Published August 1, 2020 | Version v1
Taxonomic treatment Open

Gordonia mangrovi Xie & Zhou & Xu & Wu & Xia & Zhang & Huang & Huang 2020, SP. NOV.

Description

DESCRIPTION OF GORDONIA MANGROVI SP. NOV.

Gordonia mangrovi (man.gro ˊ vi. N.L. gen. n. mangrovi of a mangrove, referring to the isolation of the type strain from mangrove soil).

Cells are Gram-stain-positive, aerobic and rod-shaped. Colonies grow well on ISP2 agar and are reddish-orange. Grows on ISP1, ISP3, ISP5 and ISP7 agar, but not on ISP4 or ISP6 agar. Diffusible pigments including melanoid pigments are not formed. Growth occurs at pH 5–10, at 20–40 °C and in the presence of 0–8% NaCl. Catalase activity and nitrate reduction are positive. Degrades arbutin, but not aesculin, casein, hypoxanthine or xanthine. D-Arabitol,D-fructose, D-glucose,D-mannose, trehalose,L-rhamnose, meso -inositol and sucrose are utilized as sole carbon sources, but not cellulose, cellobiose, D-galactose, lactose,D-xylose or raffinose. L-Arginine,L-asparagine,L-cysteine, L-methionine, L-proline, L-serine, L-threonine and L-valine are used as sole nitrogen sources, but not L-histidine orL-phenylalanine. Resistant to chloramphenicol, gentamicin, kanamycin, nalidixic acid, novobiocin, penicillin G, sulfamethoxazole, tetracycline and tobramycin, but sensitive to rifampin. The cell wall contains meso -diaminopimelic acid. The wholecell sugars are arabinose and galactose. Mycolic acids are present. The menaquinones are MK-9(H 2) an MK-7(H 2). The predominant phospholipids are composed of diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol. The major fatty acids are C 16:0, C 16:1 ω 7 c /C 16:1 ω 6 c, C 18:0 10-methyl (TBSA), C 18:0 and C 18:1 ω 9 c. The DNA G+C content of the type strain is 67.0mol%.

The type strain, HNM0687 T (=CCTCC AA 2019074 T =KCTC 49383 T), was isolated from mangrove soil. The GenBank accession number for the 16S rRNA gene of strain HNM0687 T is MN653213. The GenBank accession number for the gyrB gene of strain HNM0687 T is MN759309. The GenBank accession number for the genome sequence of strain HNM0687 T is WMBR00000000.

Notes

Published as part of Xie, Yuhui, Zhou, Shuangqing, Xu, Yun, Wu, Wenqiang, Xia, Wei, Zhang, Rongping, Huang, Dongyi & Huang, Xiaolong, 2020, Gordonia mangrovi sp. nov., a novel actinobacterium isolated from mangrove soil in Hainan, pp. 4537-4543 in International Journal of Systematic and Evolutionary Microbiology 70 (8) on page 4541, DOI: 10.1099/ijsem.0.004310, http://zenodo.org/record/6223959

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Additional details

Biodiversity

Collection code
HNM
Material sample ID
HNM0687T
Scientific name authorship
Xie & Zhou & Xu & Wu & Xia & Zhang & Huang & Huang
Kingdom
Plantae
Phylum
Tracheophyta
Order
Ericales
Family
Theaceae
Genus
Gordonia
Species
mangrovi
Taxon rank
species
Taxonomic status
sp. nov.
Type status
holotype
Taxonomic concept label
Gordonia mangrovi Xie, Zhou, Xu, Wu, Xia, Zhang, Huang & Huang, 2020