Published February 22, 2022
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Figure 3 from: Gaite PLA, Aala, Jr. WF, Bacus MG, Labrador CC, Numeron AMM, Gamalo LED, Murao LAE (2022) The first complete mitochondrial genome sequence of Cynopterus brachyotis (Chiroptera, Pteropodidae) from the Philippines. Biodiversity Data Journal 10: e72768. https://doi.org/10.3897/BDJ.10.e72768
Authors/Creators
- 1. Philippine Genome Center Mindanao, University of the Philippines Mindanao, Davao City, Philippines
- 2. Department of Biological Sciences and Environmental Studies, University of the Philippines Mindanao, Davao City, Philippines|Philippine Genome Center Mindanao, University of the Philippines Mindanao, Davao City, Philippines|Wildlife-Human Interaction Studies, Ecological Research and Biodiversity Conservation Laboratory, University of the Philippines Mindanao, Davao City, Philippines
Description
Figure 3 Maximum Likelihood phylogeny of fruit bat A) CO1 and B) cytb gene obtained from GenBank. The tree was generated using MEGA 7 with 1000 bootstrap replicates. For the CO1 gene, a multiple sequence alignment of 1,533 bp was used for the phylogenetic analysis using the Maximum-Likelihood method with the HKY+G+I model in MEGA 7 with 1000 bootstrap replicates. For the cytb gene, a multiple sequence alignment of 1,134 bp was used for the phylogenetic analysis using the Maximum-Likelihood method with the GTR+G+I model in MEGA 7 with 1000 bootstrap replicates. The scale bar denotes the number of substitutions per site which is reflected in the branch lengths (i.e. 0.5 value means 5 nucleotide changes for every 10 nucleotides). Bootstrap values for clade support are written on the nodes of the branches. An outgroup consisting of fish mitogenomes was included in the phylogenetic tree inference.
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- Journal article: 10.3897/BDJ.10.e72768 (DOI)