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Published September 9, 2016 | Version v1.11.0

viral-ngs: v1.11.0

  • 1. Broad Institute
  • 2. Broad Institute of MIT and Harvard
  • 3. MIT
  • 4. DNAnexus

Description

New:

  • Dockerfile for viral-ngs now available to build containerized installs (likely moving to viral-ngs-deploy in the near future)

Fixed:

  • Broad cluster submitter now supports CPU binding to reflect UGER change
  • Broad cluster submitter now uses h_vmem to reflect UGER change
  • easy-install script now checks for host system Python and exits if it is unavailable
  • spikein_report's call to bwamem_idxstats is fixed in reports.rules
  • Depletion databases in config.yaml are now lists of full paths
  • Memory requests for Broad cluster are now per-core

Files

viral-ngs-v1.11.0.zip

Files (46.2 MB)

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md5:2f1fdab5ec94307de8cd11da09731acc
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Additional details