There is a newer version of the record available.

Published February 15, 2022 | Version 1.10.3
Software Open

nextstrain/nextclade: 1.10.3

Authors/Creators

  • 1. Biozentrum, University of Basel
  • 2. @neherlab @nextstrain
  • 3. @Snyk
  • 4. Nextstrain
  • 5. University of North Carolina
  • 6. University of Freiburg
  • 7. ETH Zurich @cevo-public
  • 8. University of Missouri
  • 9. Faculty of Computer Science, Dalhousie University
  • 10. The Francis Crick Institute
  • 11. Fred Hutch - @blab
  • 12. Fred Hutch

Description

Nextclade Web 1.13.2, Nextclade CLI 1.10.3, Nextalign CLI 1.10.3 (2022-02-15)

This is a bug fix release.

[Fix] Ignore private reversions of deletions when calculating divergence

Since their introduction, individual private reversions of deletions contributed extra to divergence. This was unexpected, so we removed reversions of deletions from consideration when calculating divergence in Nextclade.

[Fix] Sort private substitutions on the tree

Private substitutions are now sorted by position when they are displayed on the tree page

[Fix] "truncated" text in the insertions tooltip

In Nextclade Web, long insertions no longer have a visual bug when the "truncated" text is displayed twice.

Files

nextstrain/nextclade-1.10.3.zip

Files (19.5 MB)

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md5:082f6ad0639e9728b542a88f4d135792
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Additional details

Related works

Is supplement to
https://github.com/nextstrain/nextclade/tree/1.10.3 (URL)