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Published January 1, 2020 | Version v1
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Genome analysis reveals that Nocardiopsis baichengensis Li et al. 2006 is a later heterotypic synonym of Nocardiopsis halophila Al-Tai and Ruan 1994

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Zhang, Xiao-Tong, Salam, Nimaichand, Xiao, Min, Asem, Mipeshwaree Devi, Li, Wen-Jun (2020): Genome analysis reveals that Nocardiopsis baichengensis Li et al. 2006 is a later heterotypic synonym of Nocardiopsis halophila Al-Tai and Ruan 1994. International Journal of Systematic and Evolutionary Microbiology 70 (1): 89-92, DOI: 10.1099/ijsem.0.003721, URL: http://dx.doi.org/10.1099/ijsem.0.003721

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LSID
urn:lsid:plazi.org:pub:2A45FFF5B974B147FFF8CA115E3BFFA8
URL
http://publication.plazi.org/id/2A45FFF5B974B147FFF8CA115E3BFFA8

Has part
Taxonomic treatment: 10.5281/zenodo.6310646 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/D67C878DB977B144FF81CAA65F85FD4A (URL)
Figure: 10.5281/zenodo.6081065 (DOI)
Dataset: http://table.plazi.org/id/0AAA6613B976B145FF81CAA75B72FF61 (URL)
Dataset: http://table.plazi.org/id/0AAA6613B976B145FF81C8015D8AFD8A (URL)
Dataset: http://table.plazi.org/id/0AAA6613B976B145FF81CE215A57FBEB (URL)
Is source of
Dataset: http://www.gbif.org/dataset/405ad849-36b6-4b6a-a1b4-309bd876ffe2 (URL)

References

  • 1. Li H-W, Zhi X-Y, Yao J-C, Zhou Y, Tang S-K et al. Comparative genomic analysis of the genus Nocardiopsis provides new insights into its genetic mechanisms of environmental adaptability. PLoS One 2013;8:e61528.
  • 2. Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 2014;30: 1312-1313.
  • 3. Li W-J KRM, Wang D, Tang S-K, Lee J-C et al. Five novel species of the genus Nocardiopsis isolated from hypersaline soils and emended description of Nocardiopsis salina Li, et al. Int J Syst Evol Microbiol 2004;2006:1089-1096.
  • 4. Meier-Kolthoff JP, Auch AF, Klenk H-P, Goker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 2013;14:60.
  • 5. Altschul S et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997;25: 3389-3402.
  • 6. Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M et al. Versatile and open software for comparing large genomes. Genome Biol 2004;5:R12.
  • 7. Richter M, Rossello-Mora R, Oliver Glockner F, Peplies J. JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison. Bioinformatics 2016;32: 929-931.
  • 8. Hua ZS, Qu YN, Zhu Q, Zhou EM, Qi YL et al. Genomic inference of the metabolism and evolution of the archaeal phylum Aigarchaeota. Nat Commun 2018;9:2832.
  • 9. Al-Tai AM, Ruan J-S. Nocardiopsis halophila sp. nov., a new Halophilic Actinomycete isolated from soil. Int J Syst Bacteriol 1994;44: 474-478.
  • 10. Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T et al. Genome-based taxonomic classification of the phylum Actinobacteria. Front Microbiol 2007;2018:9.
  • 11. Parker CT, Tindall BJ, Garrity GM. International code of nomenclature of prokaryotes. Int J Syst Evol Microbiol 2019;69:S1-S111.