Published May 15, 2022
| Version v2
Dataset
Open
VesselExpress: Rapid and fully automated blood vasculature analysis in 3D light-sheet image volumes of different organs
Creators
- Spangenberg, Philippa
- Hagemann, Nina
- Squire, Anthony
- Förster, Nils
- Krauß, Sascha D.
- Qi, Yachao
- Yusuf, Ayan Mohamud
- Wang, Jing
- Grüneboom, Anika
- Kowitz, Lennart
- Korste, Sebastian
- Totzek, Matthias
- Cibir, Zülal
- Tuz, Ali Ata
- Singh, Vikramjeet
- Siemes, Devon
- Struensee, Laura
- Engel, Daniel R.
- Ludewig, Peter
- Melo, Luiza Martins Nascentes
- Helfrich, Iris
- Chen, Jianxu
- Gunzer, Matthias
- Hermann, Dirk M.
- Mosig, Axel
Description
This dataset contains raw, segmented and skeletonized 3D light-sheet microscopic image volumes of blood vessels of different organs which were processed by VesselExpress. Please find the software here: https://github.com/RUB-Bioinf/VesselExpress. For details on how to run and setup the software please watch our tutorial (https://youtu.be/a8GWVKJNh68).
Files
VesselExpress_Data.zip
Files
(41.3 GB)
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