Published January 17, 2022
| Version v0.26.0
Software
Open
lczech/genesis: genesis v0.26.0
Authors/Creators
- 1. Carnegie Institution for Science
- 2. Cirad
Description
Notable Changes
Population:
- Add Genome Locus class and comparison operators
- Add Variant Parallel Input Iterator
- Add Variant Input Iterator
- Refine Pileup Reader to allow parsing Variants directly
- Change Window Iterator start position to 1
- Switch to always using local htslib
- Disable htslib libcurl requirement
Tree:
- Fix EMD computation with zero branch lengths
- Improve tree diameter function for speed and memory efficiency
- Add Simple Newick Reader and Writer
Utils:
- Add Interval Tree implementation
- Add bare Optional class
- Refactor Lambda Iterator
- Refine Options guess number of threads
- Relax binomial coefficient behaviour to allow for larger numbers
Files
lczech/genesis-v0.26.0.zip
Files
(5.4 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:8200d97d1e10b660649a06ce26af43a9
|
5.4 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/lczech/genesis/tree/v0.26.0 (URL)