Published December 25, 2022
| Version v1
Dataset
Open
A genomic timescale for placental mammal evolution: Datasets
Authors/Creators
- 1. Texas A&M University
- 2. University of Bern
- 3. University of California, Davis
- 4. Pontifical Catholic University of Rio Grande do Sul
- 5. American Museum of Natural History
- 6. University of California, Riverside
Description
Datasets used in Foley N.M., Mason, V.C., Harris A.J., Bredemeyer K.R., Damas J., Lewin H.A., Eizirik E., Gatesy J., Zoonomia Consortium, Springer M.S., and W.J. Murphy (2022) A genomic timescale for placental mammal evolution. Science. x:x-x
This repository includes
- Alignments for whole genome analyses
- Alignments for sliding windows analyses across chromosome 1, chromosome 21, chromosome 22 and the X chromosome
- Sliding window alignments used to estimate divergence times
- Preliminary topologies derived from the low recombining region on the X chromosome
- Machine readable (.csv) versions of tables presented in the paper
- Per chromosome fasta files referenced to the human genome exported from the HAL alignment as described in the paper.
Files
DivergenceTimeAnalysis_SlidingWindowAlignments_Chr1_21_22_X.zip
Files
(107.2 GB)
| Name | Size | |
|---|---|---|
|
md5:c03b7d3c015a33edd69ce881b906ead8
|
4.8 GB | Download |
|
md5:715eaeadb84326ad6d3ab0b5e93576f5
|
4.8 GB | Download |
|
md5:b299056eb1307e55d1e9c71ed12df503
|
4.7 GB | Download |
|
md5:11b54127a01127dc1087ec8f1b0894a0
|
3.5 GB | Download |
|
md5:8ade5c4c11d1b8a6cab25bb94d8e8008
|
3.3 GB | Download |
|
md5:2e7ce7e469b59e9d886c227afff3e377
|
3.0 GB | Download |
|
md5:a5532bec31bcd9160c595ffc9e3126a8
|
2.9 GB | Download |
|
md5:242617845fcce765115a729b8ed4a4bf
|
2.8 GB | Download |
|
md5:2bb0bde054899cc5d9650accfa617442
|
2.7 GB | Download |
|
md5:ce086b9cdea71faa0dee2521404834a1
|
1.3 GB | Download |
|
md5:9f1b91088faf1600f1b6208215c02cda
|
8.4 GB | Download |
|
md5:d3a7360d8c440f15cec98aafac5a8573
|
2.3 GB | Download |
|
md5:3aa806ae37350d95209d7e1f09b8e53c
|
1.2 GB | Download |
|
md5:300de717494d6787f5142dc08f90ce46
|
1.2 GB | Download |
|
md5:924cfbc1aacb1ff5472b8a4640f906b1
|
9.0 GB | Download |
|
md5:6855487408a6cb10da4004458d40851a
|
7.5 GB | Download |
|
md5:bc3c52db1984ae3a2177d1a503d2d6c1
|
6.6 GB | Download |
|
md5:2b2bfc20a1fc3060171a22993330074e
|
6.7 GB | Download |
|
md5:3a8bbb691e9c03f3324562bdedc14477
|
6.2 GB | Download |
|
md5:72a8be881f6e54f9c2f87ab684072f08
|
5.5 GB | Download |
|
md5:45c05ec8436213da0ca40a5579da23c6
|
5.0 GB | Download |
|
md5:ceb177e2913bf359d6980f70216b350d
|
4.3 GB | Download |
|
md5:3dac9aa086cd538ab26e031337544252
|
4.2 GB | Download |
|
md5:d94d1b8cf4ad382a45d118b16f73d54b
|
268.2 MB | Preview Download |
|
md5:03d81173414fcbba22bc5cc8a2f9698f
|
42.8 kB | Preview Download |
|
md5:78ff8675cd3f36fd7ef07a8aa0d209d4
|
5.0 GB | Preview Download |
|
md5:1266d83f9b1fa1ff42d7b03063bbd527
|
14.8 kB | Preview Download |
|
md5:21f00b3639ec451e338b89b8127bc07e
|
84.7 MB | Preview Download |