There is a newer version of the record available.

Published May 1, 2022 | Version v3
Dataset Restricted

The first mitochondrial genome of Creophilus Leach and Platydracus Thomson (Coleoptera: Staphylinidae: Staphylinini) and phylogenetic implications

Authors/Creators

  • 1. Hebei Normal University
  • 2. Tianjin Academy of Agricultural Sciences
  • 3. Qinghai Normal University
  • 4. National Long-term Base for Scientific Research of the Qilian Mountain National Park

Description

Datasets: The trimmed data matrices and partition files as shown in Table 2.

  1. P1P2R_Phylip.phy: 1st and 2nd positions of PCG nucleotides and rRNAs.
  2. P1P2R_partition.txt: Partition scheme for P1P2R_Phylip.phy.
  3. P12R_Phylip.phy: the united first two positions of PCG nucleotides plus rRNAs.
  4. P12R_partition.txt: Partition scheme for P12R_Phylip.phy.
  5. P2R_Phylip.phy: 2nd position of PCG nucleotides and rRNAs.
  6. P2R_partition.txt: Partition scheme for P2R_Phylip.phy.
  7. AA_Phylip.phy: PCG amino acids.
  8. AA_partition.txt: Partition scheme for AA_Phylip.phy.

Trees: The expanded consensus trees constructed by all data compositions, partition schemes, and models shown in Table 2.

  1. P1P2R_FP.tree: edge-unlinked and full partitioned (FP) dataset of PCG positions 1 & 2 + rRNAs.
  2. P1P2R_MP.tree: edge-unlinked and merged partitioned (MP) dataset of PCG positions 1 & 2 + rRNAs.
  3. P1P2R_NP.tree: unpartitioned (NP) dataset of PCG positions 1 & 2 + rRNAs.
  4. P1P2R_NPH4.tree: NP dataset of PCG positions 1 & 2 + rRNAs under +H4 heterotachy model.
  5. P12R_FP.tree: FP dataset of united PCG positions 1 & 2 + rRNAs.
  6. P12R_MP.tree: MP dataset of united PCG positions 1 & 2 + rRNAs.
  7. P12R_NP.tree: NP dataset of united PCG positions 1 & 2 + rRNAs.
  8. P12R_NPH4.tree: NP dataset of united PCG positions 1 & 2 + rRNAs under +H4 heterotachy model.
  9. P2R_FP.tree: FP dataset of PCG position 2 + rRNAs.
  10. P2R_MP.tree: MP dataset of PCG position 2 + rRNAs.
  11. P2R_NP.tree: NP dataset of PCG position 2 + rRNAs.
  12. P2R_NPH4.tree: NP dataset of PCG position 2 + rRNAs under +H4 heterotachy model.
  13. AA_FP.tree: FP dataset of PCG amino acids.
  14. AA_MP.tree: MP dataset of PCG amino acids.
  15. AA_NP.tree: NP dataset of PCG amino acids.
  16. AA_NPC60.tree: NP dataset of PCG amino acids under +C60 mixture model.

Tables S1-2.xlsx:

  1. Table S1: Pairwise similarity of nucleotide alignments between Creophilus maxillosus and the 92 sampled species in the Staphylinoidea.
  2. Table S2: Percentage of conserved sites in amino acid alignments between Creophilus maxillosus and the 92 sampled species in the Staphylinoidea.

Data Use Statement. Data on genetic material contained in this paper are published for non-commercial use only. Utilization by third parties for purposes other than non-commercial scientific research may infringe the conditions under which the genetic resources were originally accessed, and should not be undertaken without obtaining consent from the corresponding author of the paper and/or obtaining permission from the original provider of the genetic material.

 

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.