Published December 31, 2021
| Version v2
Dataset
Open
apomixis_parallel_evolution, and Fortunella hindsii (Citrus hindsii )Genome sequencing and assembly
Authors/Creators
Description
##The assemble(genome) files
Citrus hindsii (Mini citrus)Genome assembly
Citrus hindsii (Mini citrus)Genome assembly gene model gff3 file
Citrus hindsii (Mini citrus)Genome assembly function annotation
Citrus hindsii (Mini citrus)Genome assembly TE gff3 file
##The population dataset
LD_pur.vcf.gz //The LD purning SNP vcfs (1.4 M sites) used in analysis
log10_auxin.txt //The expression (log10) related to auxin pathway
sjg.temergedref.fasta.gz //The TE insertion modify genome in popTE2 analysis
SVs.vcf.gz //The SV vcfs used in the paper
te-hierarchy.txt //The TE classfication in popTE2 analysis
TPM_count.txt //All samples expression in TMP count
unfiltered.vcf.gz //The unfiltered vcfs file (7.3 M sites, within 0.4 M indels)
Files
log10_auxin.txt
Files
(916.4 MB)
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