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Published December 1, 2021 | Version SNT-4.0.4
Software Open

morphonets/SNT: SNT-4.0.4

Authors/Creators

  • 1. Janelia Research Campus
  • 2. Max Delbrueck Center for Molecular Medicine
  • 3. UW-Madison LOCI
  • 4. @Microsoft
  • 5. Friedrich Miescher Institute for Biomedical Research
  • 6. Ikerbasque / Basque Country University (UPV/EHU)
  • 7. LOCI
  • 8. Institut Pasteur

Description

  • Reconstruction Viewer:
    • New: Support for off-screen (headless) canvases, useful for obtaining programmatic snapshots of scenes without displaying them
    • New: Support for EmulGL (CPU rendering), useful for machines without GPU, or installations with problematic JOGL installs.
    • New: Support for Allen CCFv3 (mouse atlas)
    • Improved: Consistency of preset ("Ctrl+click") views
    • Fixed: #69
  • Tracing:
    • New: Subvolume statistics are now enabled by default (details)
    • Improved: Path Fitting performance (up to 30x faster!) (#72)
  • Analysis:
    • New: All MouseLight reconstructions are now handled in CCFv3
    • New: timelapse_segmentation notebook (details)
    • Fixed: Topology artifact when scaling/translating a tree

Full Changelog: https://github.com/morphonets/SNT/compare/SNT-4.0.3...SNT-4.0.4

Compiled artifact (without dependencies): SNT-4.0.4.jar

Files

morphonets/SNT-SNT-4.0.4.zip

Files (12.2 MB)

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md5:9963d496c3f37d75df526cc2c57b9878
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Additional details

Related works

Is supplement to
https://github.com/morphonets/SNT/tree/SNT-4.0.4 (URL)