There is a newer version of the record available.

Published November 29, 2021 | Version 1.5.1
Software Open

nextstrain/nextclade: 1.5.1

Authors/Creators

  • 1. Biozentrum, University of Basel
  • 2. @neherlab @nextstrain
  • 3. @Snyk
  • 4. Nextstrain
  • 5. University of North Carolina
  • 6. University of Freiburg
  • 7. ETH Zurich @cevo-public
  • 8. University of Missouri
  • 9. Faculty of Computer Science, Dalhousie University
  • 10. The Francis Crick Institute
  • 11. Fred Hutch - @blab

Description

Nextclade Web 1.8.1, Nextclade CLI 1.5.1 (2021-11-27) [Fix] Avoid crash when relative shift (bandwidth) is larger than query length

In rare cases Nextclade 1.5.0 could crash during alignment of some of the short peptides. This has been fixed in this version.

[Fix] Improve peptide alignment

We improved heuristics which determine band width and shift for the peptide alignment, so that some of the peptides with large insertions can now be aligned.

Files

nextstrain/nextclade-1.5.1.zip

Files (17.7 MB)

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md5:1f8bde3459bf694f6c0172250bdf212b
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Additional details

Related works

Is supplement to
https://github.com/nextstrain/nextclade/tree/1.5.1 (URL)