Published July 6, 2016 | Version v1.0

SCODE: Supervised Complex Detection

  • 1. University of Virginia, Department of Computer Science

Description

This release contains the software implementation of SCODE (Supervised Complex Detection). The software is described in our paper SCODE: A Cytoscape app for supervised complex detection in protein-protein interaction graphs (2016).

This app allows users to search for complexes in weighted graphs using supervised learning on a Bayesian network model. It is based on the algorithm developed by Qi et al (doi: 10.1093/bioinformatics/btn164).

Files

Paper16-SCODE-v1.0.zip

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